Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFRAP16234 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PDGFRAP16234 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFRAP16234 AC004987.2-201ENST00000395959 1148 ntBASIC16.84■□□□□ 0.29
PDGFRAP16234 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.84■□□□□ 0.29
PDGFRAP16234 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.84■□□□□ 0.29
PDGFRAP16234 AL353705.2-201ENST00000428243 662 ntBASIC16.84■□□□□ 0.29
PDGFRAP16234 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.84■□□□□ 0.29
PDGFRAP16234 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.84■□□□□ 0.29
PDGFRAP16234 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.84■□□□□ 0.29
PDGFRAP16234 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.84■□□□□ 0.29
PDGFRAP16234 AC003101.2-201ENST00000612557 442 ntBASIC16.84■□□□□ 0.29
PDGFRAP16234 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.84■□□□□ 0.29
PDGFRAP16234 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.84■□□□□ 0.29
PDGFRAP16234 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFRAP16234 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.84■□□□□ 0.29
PDGFRAP16234 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFRAP16234 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.84■□□□□ 0.29
PDGFRAP16234 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFRAP16234 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFRAP16234 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PDGFRAP16234 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PDGFRAP16234 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.84■□□□□ 0.29
PDGFRAP16234 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.84■□□□□ 0.29
PDGFRAP16234 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFRAP16234 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.84■□□□□ 0.29
PDGFRAP16234 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFRAP16234 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFRAP16234 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFRAP16234 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.84■□□□□ 0.29
PDGFRAP16234 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.83■□□□□ 0.29
PDGFRAP16234 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.83■□□□□ 0.29
PDGFRAP16234 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PDGFRAP16234 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
PDGFRAP16234 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
PDGFRAP16234 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFRAP16234 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFRAP16234 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFRAP16234 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFRAP16234 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFRAP16234 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFRAP16234 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFRAP16234 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFRAP16234 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFRAP16234 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFRAP16234 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.83■□□□□ 0.28
PDGFRAP16234 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFRAP16234 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFRAP16234 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFRAP16234 FAM86GP-201ENST00000448322 971 ntBASIC16.83■□□□□ 0.28
PDGFRAP16234 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.83■□□□□ 0.28
PDGFRAP16234 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.83■□□□□ 0.28
PDGFRAP16234 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.83■□□□□ 0.28
PDGFRAP16234 CICP6-201ENST00000457191 2729 ntBASIC16.83■□□□□ 0.28
PDGFRAP16234 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.83■□□□□ 0.28
PDGFRAP16234 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.83■□□□□ 0.28
PDGFRAP16234 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.83■□□□□ 0.28
PDGFRAP16234 AL512356.2-201ENST00000546955 174 ntBASIC16.83■□□□□ 0.28
PDGFRAP16234 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFRAP16234 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFRAP16234 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.83■□□□□ 0.28
PDGFRAP16234 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.83■□□□□ 0.28
PDGFRAP16234 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.83■□□□□ 0.28
PDGFRAP16234 AL355385.1-201ENST00000606123 409 ntBASIC16.83■□□□□ 0.28
PDGFRAP16234 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.83■□□□□ 0.28
PDGFRAP16234 MIR6080-201ENST00000617359 66 ntBASIC16.83■□□□□ 0.28
PDGFRAP16234 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.83■□□□□ 0.28
PDGFRAP16234 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.83■□□□□ 0.28
PDGFRAP16234 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.83■□□□□ 0.28
PDGFRAP16234 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.83■□□□□ 0.28
PDGFRAP16234 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFRAP16234 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFRAP16234 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFRAP16234 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PDGFRAP16234 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.83■□□□□ 0.28
PDGFRAP16234 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFRAP16234 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFRAP16234 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PDGFRAP16234 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFRAP16234 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFRAP16234 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFRAP16234 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFRAP16234 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.82■□□□□ 0.28
PDGFRAP16234 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFRAP16234 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFRAP16234 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.82■□□□□ 0.28
PDGFRAP16234 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFRAP16234 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFRAP16234 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PDGFRAP16234 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFRAP16234 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PDGFRAP16234 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFRAP16234 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFRAP16234 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFRAP16234 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFRAP16234 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PDGFRAP16234 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.82■□□□□ 0.28
PDGFRAP16234 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.82■□□□□ 0.28
PDGFRAP16234 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.82■□□□□ 0.28
PDGFRAP16234 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms