Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DOBP13765 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DOBP13765 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DOBP13765 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HLA-DOBP13765 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.4□□□□□ -0.1
HLA-DOBP13765 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
HLA-DOBP13765 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
HLA-DOBP13765 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DOBP13765 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DOBP13765 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DOBP13765 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DOBP13765 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
HLA-DOBP13765 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HLA-DOBP13765 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
HLA-DOBP13765 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.4□□□□□ -0.1
HLA-DOBP13765 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DOBP13765 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DOBP13765 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DOBP13765 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DOBP13765 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.4□□□□□ -0.1
HLA-DOBP13765 AP000344.2-201ENST00000512987 629 ntBASIC14.4□□□□□ -0.1
HLA-DOBP13765 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
HLA-DOBP13765 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.4□□□□□ -0.1
HLA-DOBP13765 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.4□□□□□ -0.1
HLA-DOBP13765 RARRES2P9-201ENST00000565168 469 ntBASIC14.4□□□□□ -0.1
HLA-DOBP13765 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DOBP13765 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.4□□□□□ -0.1
HLA-DOBP13765 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
HLA-DOBP13765 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HLA-DOBP13765 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
HLA-DOBP13765 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DOBP13765 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HLA-DOBP13765 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.4□□□□□ -0.1
HLA-DOBP13765 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DOBP13765 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DOBP13765 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DOBP13765 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HLA-DOBP13765 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.4□□□□□ -0.1
HLA-DOBP13765 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DOBP13765 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DOBP13765 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DOBP13765 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DOBP13765 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DOBP13765 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HLA-DOBP13765 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DOBP13765 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DOBP13765 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DOBP13765 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DOBP13765 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DOBP13765 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
HLA-DOBP13765 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DOBP13765 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DOBP13765 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HLA-DOBP13765 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DOBP13765 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DOBP13765 AC018892.3-201ENST00000623986 2499 ntBASIC14.39□□□□□ -0.11
HLA-DOBP13765 AC007326.2-201ENST00000624224 7579 ntBASIC14.39□□□□□ -0.11
HLA-DOBP13765 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HLA-DOBP13765 AP001282.1-201ENST00000531301 1499 ntBASIC14.39□□□□□ -0.11
HLA-DOBP13765 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DOBP13765 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DOBP13765 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DOBP13765 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.39□□□□□ -0.11
HLA-DOBP13765 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DOBP13765 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.39□□□□□ -0.11
HLA-DOBP13765 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DOBP13765 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.39□□□□□ -0.11
HLA-DOBP13765 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DOBP13765 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DOBP13765 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.39□□□□□ -0.11
HLA-DOBP13765 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DOBP13765 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.39□□□□□ -0.11
HLA-DOBP13765 GPS2P2-201ENST00000430745 888 ntBASIC14.39□□□□□ -0.11
HLA-DOBP13765 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DOBP13765 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.39□□□□□ -0.11
HLA-DOBP13765 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.39□□□□□ -0.11
HLA-DOBP13765 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HLA-DOBP13765 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
HLA-DOBP13765 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.39□□□□□ -0.11
HLA-DOBP13765 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.39□□□□□ -0.11
HLA-DOBP13765 AC004835.2-201ENST00000603762 682 ntBASIC14.39□□□□□ -0.11
HLA-DOBP13765 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.39□□□□□ -0.11
HLA-DOBP13765 AC134684.3-201ENST00000641758 218 ntBASIC14.39□□□□□ -0.11
HLA-DOBP13765 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DOBP13765 AL139384.1-201ENST00000612143 3047 ntBASIC14.39□□□□□ -0.11
HLA-DOBP13765 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.39□□□□□ -0.11
HLA-DOBP13765 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DOBP13765 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
HLA-DOBP13765 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.39□□□□□ -0.11
HLA-DOBP13765 AL691432.1-201ENST00000596308 1422 ntBASIC14.39□□□□□ -0.11
HLA-DOBP13765 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.39□□□□□ -0.11
HLA-DOBP13765 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DOBP13765 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DOBP13765 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DOBP13765 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.39□□□□□ -0.11
HLA-DOBP13765 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DOBP13765 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DOBP13765 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.38□□□□□ -0.11
HLA-DOBP13765 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HLA-DOBP13765 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms