Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
CD28P10747 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD28P10747 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD28P10747 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD28P10747 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD28P10747 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.55□□□□□ -0.4
CD28P10747 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CD28P10747 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD28P10747 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CD28P10747 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CD28P10747 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CD28P10747 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD28P10747 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD28P10747 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CD28P10747 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.55□□□□□ -0.4
CD28P10747 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD28P10747 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CD28P10747 AC098614.1-201ENST00000368528 745 ntBASIC12.55□□□□□ -0.4
CD28P10747 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CD28P10747 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD28P10747 AP006294.1-201ENST00000415407 339 ntBASIC12.55□□□□□ -0.4
CD28P10747 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CD28P10747 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.55□□□□□ -0.4
CD28P10747 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.55□□□□□ -0.4
CD28P10747 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD28P10747 RN7SL752P-201ENST00000463779 287 ntBASIC12.55□□□□□ -0.4
CD28P10747 TPRX2P-201ENST00000535362 881 ntBASIC12.55□□□□□ -0.4
CD28P10747 WASH4P-201ENST00000564273 1246 ntBASIC12.55□□□□□ -0.4
CD28P10747 AC007431.3-201ENST00000623221 587 ntBASIC12.55□□□□□ -0.4
CD28P10747 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD28P10747 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CD28P10747 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CD28P10747 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD28P10747 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD28P10747 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD28P10747 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD28P10747 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD28P10747 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CD28P10747 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD28P10747 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC12.55□□□□□ -0.4
CD28P10747 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD28P10747 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.55□□□□□ -0.4
CD28P10747 HLA-A-202ENST00000376806 1854 ntBASIC12.55□□□□□ -0.4
CD28P10747 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD28P10747 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CD28P10747 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.54□□□□□ -0.4
CD28P10747 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC12.54□□□□□ -0.4
CD28P10747 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CD28P10747 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CD28P10747 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.54□□□□□ -0.4
CD28P10747 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
CD28P10747 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.54□□□□□ -0.4
CD28P10747 AC078925.2-201ENST00000624013 1973 ntBASIC12.54□□□□□ -0.4
CD28P10747 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CD28P10747 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC12.54□□□□□ -0.4
CD28P10747 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC12.54□□□□□ -0.4
CD28P10747 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CD28P10747 AL118508.1-201ENST00000613502 2345 ntBASIC12.54□□□□□ -0.4
CD28P10747 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC12.54□□□□□ -0.4
CD28P10747 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
CD28P10747 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC12.54□□□□□ -0.4
CD28P10747 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC12.54□□□□□ -0.4
CD28P10747 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.54□□□□□ -0.4
CD28P10747 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC12.54□□□□□ -0.4
CD28P10747 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
CD28P10747 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC12.54□□□□□ -0.4
CD28P10747 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
CD28P10747 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12.54□□□□□ -0.4
CD28P10747 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.54□□□□□ -0.4
CD28P10747 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.54□□□□□ -0.4
CD28P10747 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.54□□□□□ -0.4
CD28P10747 AL589987.1-201ENST00000453380 819 ntBASIC12.54□□□□□ -0.4
CD28P10747 INE1-201ENST00000456273 945 ntBASIC12.54□□□□□ -0.4
CD28P10747 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.54□□□□□ -0.4
CD28P10747 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.54□□□□□ -0.4
CD28P10747 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.54□□□□□ -0.4
CD28P10747 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms