Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 AP001282.1-201ENST00000531301 1499 ntBASIC17.43■□□□□ 0.38
CCDC172P0C7W6 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC172P0C7W6 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC172P0C7W6 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC172P0C7W6 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC172P0C7W6 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC172P0C7W6 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC172P0C7W6 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC172P0C7W6 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC172P0C7W6 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC172P0C7W6 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC172P0C7W6 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC172P0C7W6 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC172P0C7W6 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC172P0C7W6 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC172P0C7W6 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC172P0C7W6 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCDC172P0C7W6 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC172P0C7W6 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC172P0C7W6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC172P0C7W6 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC172P0C7W6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC172P0C7W6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC172P0C7W6 PDPK2P-202ENST00000562415 1191 ntBASIC17.42■□□□□ 0.38
CCDC172P0C7W6 AC018845.2-201ENST00000568326 409 ntBASIC17.42■□□□□ 0.38
CCDC172P0C7W6 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC172P0C7W6 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC172P0C7W6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC172P0C7W6 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC172P0C7W6 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC172P0C7W6 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
CCDC172P0C7W6 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.41■□□□□ 0.38
CCDC172P0C7W6 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 AL591424.1-201ENST00000442569 1213 ntBASIC17.41■□□□□ 0.38
CCDC172P0C7W6 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC172P0C7W6 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC172P0C7W6 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms