Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.54□□□□□ -0.08
FREM3P0C091 TPRX2P-201ENST00000535362 881 ntBASIC14.54□□□□□ -0.08
FREM3P0C091 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.54□□□□□ -0.08
FREM3P0C091 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.54□□□□□ -0.08
FREM3P0C091 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.54□□□□□ -0.08
FREM3P0C091 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.54□□□□□ -0.08
FREM3P0C091 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.54□□□□□ -0.08
FREM3P0C091 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
FREM3P0C091 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
FREM3P0C091 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.54□□□□□ -0.08
FREM3P0C091 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.54□□□□□ -0.08
FREM3P0C091 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FREM3P0C091 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
FREM3P0C091 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.54□□□□□ -0.08
FREM3P0C091 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
FREM3P0C091 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.54□□□□□ -0.08
FREM3P0C091 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.54□□□□□ -0.08
FREM3P0C091 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FREM3P0C091 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
FREM3P0C091 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.54□□□□□ -0.08
FREM3P0C091 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.54□□□□□ -0.08
FREM3P0C091 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FREM3P0C091 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.54□□□□□ -0.08
FREM3P0C091 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FREM3P0C091 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
FREM3P0C091 EEF1DP4-201ENST00000446006 880 ntBASIC14.54□□□□□ -0.08
FREM3P0C091 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.54□□□□□ -0.08
FREM3P0C091 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.54□□□□□ -0.08
FREM3P0C091 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.54□□□□□ -0.08
FREM3P0C091 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FREM3P0C091 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FREM3P0C091 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.54□□□□□ -0.08
FREM3P0C091 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FREM3P0C091 BTBD7P1-201ENST00000447253 1453 ntBASIC14.54□□□□□ -0.08
FREM3P0C091 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
FREM3P0C091 CYP4F24P-201ENST00000586049 1580 ntBASIC14.54□□□□□ -0.08
FREM3P0C091 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FREM3P0C091 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.54□□□□□ -0.08
FREM3P0C091 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
FREM3P0C091 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
FREM3P0C091 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FREM3P0C091 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
FREM3P0C091 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FREM3P0C091 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
FREM3P0C091 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.54□□□□□ -0.08
FREM3P0C091 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
FREM3P0C091 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FREM3P0C091 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FREM3P0C091 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
FREM3P0C091 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
FREM3P0C091 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
FREM3P0C091 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM3P0C091 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FREM3P0C091 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM3P0C091 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM3P0C091 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM3P0C091 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM3P0C091 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.53□□□□□ -0.08
FREM3P0C091 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.53□□□□□ -0.08
FREM3P0C091 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.53□□□□□ -0.08
FREM3P0C091 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM3P0C091 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FREM3P0C091 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FREM3P0C091 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM3P0C091 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
FREM3P0C091 TARDBPP1-201ENST00000442013 1203 ntBASIC14.53□□□□□ -0.08
FREM3P0C091 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM3P0C091 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.53□□□□□ -0.08
FREM3P0C091 API5-211ENST00000534695 560 ntTSL 5 BASIC14.53□□□□□ -0.08
FREM3P0C091 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.53□□□□□ -0.08
FREM3P0C091 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
FREM3P0C091 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM3P0C091 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM3P0C091 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FREM3P0C091 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FREM3P0C091 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM3P0C091 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM3P0C091 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM3P0C091 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM3P0C091 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM3P0C091 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
FREM3P0C091 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.53□□□□□ -0.08
FREM3P0C091 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM3P0C091 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM3P0C091 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FREM3P0C091 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
FREM3P0C091 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM3P0C091 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FREM3P0C091 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM3P0C091 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.53□□□□□ -0.08
FREM3P0C091 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.53□□□□□ -0.08
FREM3P0C091 AL691432.1-201ENST00000596308 1422 ntBASIC14.53□□□□□ -0.08
FREM3P0C091 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FREM3P0C091 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.53□□□□□ -0.08
FREM3P0C091 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM3P0C091 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM3P0C091 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM3P0C091 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.53□□□□□ -0.08
FREM3P0C091 RN7SL692P-201ENST00000464677 288 ntBASIC14.53□□□□□ -0.08
FREM3P0C091 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms