Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
MMP2P08253 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
MMP2P08253 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.08■□□□□ 0.16
MMP2P08253 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
MMP2P08253 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
MMP2P08253 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MMP2P08253 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
MMP2P08253 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MMP2P08253 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.08■□□□□ 0.16
MMP2P08253 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.08■□□□□ 0.16
MMP2P08253 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.08■□□□□ 0.16
MMP2P08253 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MMP2P08253 AC027369.6-201ENST00000525520 931 ntBASIC16.08■□□□□ 0.16
MMP2P08253 RFPL4AP1-201ENST00000530883 850 ntBASIC16.08■□□□□ 0.16
MMP2P08253 AC010336.2-201ENST00000564226 506 ntBASIC16.08■□□□□ 0.16
MMP2P08253 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.08■□□□□ 0.16
MMP2P08253 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.08■□□□□ 0.16
MMP2P08253 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MMP2P08253 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
MMP2P08253 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MMP2P08253 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MMP2P08253 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.16
MMP2P08253 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MMP2P08253 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.08■□□□□ 0.16
MMP2P08253 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.08■□□□□ 0.16
MMP2P08253 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.08■□□□□ 0.16
MMP2P08253 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MMP2P08253 AC092850.2-201ENST00000623821 2697 ntBASIC16.08■□□□□ 0.16
MMP2P08253 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.08■□□□□ 0.16
MMP2P08253 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MMP2P08253 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
MMP2P08253 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
MMP2P08253 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.08■□□□□ 0.16
MMP2P08253 AL139384.1-201ENST00000612143 3047 ntBASIC16.08■□□□□ 0.16
MMP2P08253 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP2P08253 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.07■□□□□ 0.16
MMP2P08253 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
MMP2P08253 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP2P08253 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MMP2P08253 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP2P08253 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MMP2P08253 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
MMP2P08253 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.07■□□□□ 0.16
MMP2P08253 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.07■□□□□ 0.16
MMP2P08253 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP2P08253 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP2P08253 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP2P08253 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP2P08253 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.07■□□□□ 0.16
MMP2P08253 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.07■□□□□ 0.16
MMP2P08253 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.07■□□□□ 0.16
MMP2P08253 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.07■□□□□ 0.16
MMP2P08253 AC074338.1-201ENST00000416825 156 ntBASIC16.07■□□□□ 0.16
MMP2P08253 TSSK5P-201ENST00000423978 907 ntBASIC16.07■□□□□ 0.16
MMP2P08253 TARDBPP1-201ENST00000442013 1203 ntBASIC16.07■□□□□ 0.16
MMP2P08253 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.07■□□□□ 0.16
MMP2P08253 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MMP2P08253 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.07■□□□□ 0.16
MMP2P08253 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.07■□□□□ 0.16
MMP2P08253 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MMP2P08253 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.07■□□□□ 0.16
MMP2P08253 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MMP2P08253 AL844908.2-201ENST00000609461 460 ntBASIC16.07■□□□□ 0.16
MMP2P08253 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.07■□□□□ 0.16
MMP2P08253 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP2P08253 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP2P08253 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
MMP2P08253 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MMP2P08253 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MMP2P08253 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.07■□□□□ 0.16
MMP2P08253 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.07■□□□□ 0.16
MMP2P08253 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP2P08253 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP2P08253 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.07■□□□□ 0.16
MMP2P08253 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MMP2P08253 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP2P08253 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.07■□□□□ 0.16
MMP2P08253 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MMP2P08253 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
MMP2P08253 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.07■□□□□ 0.16
MMP2P08253 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
MMP2P08253 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
MMP2P08253 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP2P08253 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP2P08253 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP2P08253 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
MMP2P08253 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MMP2P08253 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.06■□□□□ 0.16
MMP2P08253 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.06■□□□□ 0.16
MMP2P08253 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
MMP2P08253 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.06■□□□□ 0.16
MMP2P08253 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP2P08253 AC100757.3-201ENST00000622361 1406 ntBASIC16.06■□□□□ 0.16
MMP2P08253 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP2P08253 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP2P08253 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.06■□□□□ 0.16
MMP2P08253 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.06■□□□□ 0.16
MMP2P08253 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.06■□□□□ 0.16
MMP2P08253 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.06■□□□□ 0.16
MMP2P08253 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms