Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RETP07949 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RETP07949 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RETP07949 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.16■□□□□ 0.18
RETP07949 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RETP07949 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RETP07949 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RETP07949 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.16■□□□□ 0.18
RETP07949 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RETP07949 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RETP07949 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RETP07949 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.16■□□□□ 0.18
RETP07949 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RETP07949 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RETP07949 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RETP07949 AL589987.1-201ENST00000453380 819 ntBASIC16.16■□□□□ 0.18
RETP07949 CTBP2P5-201ENST00000454986 1264 ntBASIC16.16■□□□□ 0.18
RETP07949 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RETP07949 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
RETP07949 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.16■□□□□ 0.18
RETP07949 RNA5SP412-201ENST00000516234 123 ntBASIC16.16■□□□□ 0.18
RETP07949 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.16■□□□□ 0.18
RETP07949 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.16■□□□□ 0.18
RETP07949 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RETP07949 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.16■□□□□ 0.18
RETP07949 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.16■□□□□ 0.18
RETP07949 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.16■□□□□ 0.18
RETP07949 AC233724.13-201ENST00000598383 410 ntBASIC16.16■□□□□ 0.18
RETP07949 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.16■□□□□ 0.18
RETP07949 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.16■□□□□ 0.18
RETP07949 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RETP07949 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RETP07949 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.16■□□□□ 0.18
RETP07949 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RETP07949 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
RETP07949 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RETP07949 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.16■□□□□ 0.18
RETP07949 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.16■□□□□ 0.18
RETP07949 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.16■□□□□ 0.18
RETP07949 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RETP07949 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RETP07949 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RETP07949 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RETP07949 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RETP07949 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.16■□□□□ 0.18
RETP07949 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RETP07949 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
RETP07949 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RETP07949 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RETP07949 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RETP07949 AC018665.1-201ENST00000622927 1362 ntBASIC16.15■□□□□ 0.18
RETP07949 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.15■□□□□ 0.18
RETP07949 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RETP07949 AC022188.1-201ENST00000620960 1664 ntBASIC16.15■□□□□ 0.18
RETP07949 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.15■□□□□ 0.18
RETP07949 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RETP07949 PCDHA1-201ENST00000378133 2726 ntBASIC16.15■□□□□ 0.18
RETP07949 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RETP07949 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RETP07949 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RETP07949 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RETP07949 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RETP07949 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RETP07949 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.15■□□□□ 0.18
RETP07949 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.15■□□□□ 0.18
RETP07949 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RETP07949 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.15■□□□□ 0.18
RETP07949 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.15■□□□□ 0.18
RETP07949 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.15■□□□□ 0.18
RETP07949 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.15■□□□□ 0.18
RETP07949 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.15■□□□□ 0.18
RETP07949 AC024267.1-201ENST00000582320 895 ntBASIC16.15■□□□□ 0.18
RETP07949 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.15■□□□□ 0.18
RETP07949 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.15■□□□□ 0.18
RETP07949 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.15■□□□□ 0.18
RETP07949 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RETP07949 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RETP07949 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RETP07949 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RETP07949 LINC02199-201ENST00000506655 2702 ntBASIC16.15■□□□□ 0.18
RETP07949 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.15■□□□□ 0.18
RETP07949 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RETP07949 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RETP07949 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
RETP07949 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.14■□□□□ 0.18
RETP07949 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
RETP07949 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RETP07949 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.14■□□□□ 0.17
RETP07949 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RETP07949 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.14■□□□□ 0.17
RETP07949 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RETP07949 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RETP07949 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RETP07949 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RETP07949 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.14■□□□□ 0.17
RETP07949 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RETP07949 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RETP07949 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RETP07949 ELK2AP-201ENST00000392510 1007 ntBASIC16.14■□□□□ 0.17
RETP07949 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms