Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CTSBP07858 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSBP07858 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.12■□□□□ 0.01
CTSBP07858 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.12■□□□□ 0.01
CTSBP07858 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CTSBP07858 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CTSBP07858 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.12■□□□□ 0.01
CTSBP07858 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CTSBP07858 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CTSBP07858 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
CTSBP07858 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.12■□□□□ 0.01
CTSBP07858 TP53TG3HP-202ENST00000569755 579 ntBASIC15.12■□□□□ 0.01
CTSBP07858 AL450472.2-201ENST00000603663 1156 ntBASIC15.12■□□□□ 0.01
CTSBP07858 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSBP07858 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CTSBP07858 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.12■□□□□ 0.01
CTSBP07858 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSBP07858 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSBP07858 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.12■□□□□ 0.01
CTSBP07858 AC112504.1-201ENST00000623415 1841 ntBASIC15.12■□□□□ 0.01
CTSBP07858 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CTSBP07858 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSBP07858 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CTSBP07858 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSBP07858 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
CTSBP07858 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSBP07858 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTSBP07858 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.12■□□□□ 0.01
CTSBP07858 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSBP07858 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CTSBP07858 SLC7A15P-201ENST00000424028 1363 ntBASIC15.11■□□□□ 0.01
CTSBP07858 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSBP07858 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSBP07858 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSBP07858 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CTSBP07858 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.11■□□□□ 0.01
CTSBP07858 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.11■□□□□ 0.01
CTSBP07858 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
CTSBP07858 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
CTSBP07858 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSBP07858 AL391005.1-201ENST00000623953 2435 ntBASIC15.11■□□□□ 0.01
CTSBP07858 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSBP07858 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSBP07858 AL139384.1-201ENST00000612143 3047 ntBASIC15.11■□□□□ 0.01
CTSBP07858 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CTSBP07858 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.11■□□□□ 0.01
CTSBP07858 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSBP07858 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CTSBP07858 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSBP07858 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.11■□□□□ 0.01
CTSBP07858 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CTSBP07858 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.11■□□□□ 0.01
CTSBP07858 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CTSBP07858 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.11■□□□□ 0.01
CTSBP07858 AL596325.1-201ENST00000563991 1082 ntBASIC15.11■□□□□ 0.01
CTSBP07858 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CTSBP07858 AC012645.4-201ENST00000610691 1061 ntBASIC15.11■□□□□ 0.01
CTSBP07858 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CTSBP07858 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSBP07858 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CTSBP07858 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSBP07858 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
CTSBP07858 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CTSBP07858 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSBP07858 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CTSBP07858 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSBP07858 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTSBP07858 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.11■□□□□ 0.01
CTSBP07858 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
CTSBP07858 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CTSBP07858 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CTSBP07858 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CTSBP07858 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CTSBP07858 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CTSBP07858 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CTSBP07858 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CTSBP07858 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CTSBP07858 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CTSBP07858 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CTSBP07858 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CTSBP07858 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CTSBP07858 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CTSBP07858 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CTSBP07858 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CTSBP07858 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.1■□□□□ 0.01
CTSBP07858 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CTSBP07858 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CTSBP07858 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CTSBP07858 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CTSBP07858 DFFBP1-201ENST00000433250 979 ntBASIC15.1■□□□□ 0.01
CTSBP07858 AL353779.1-201ENST00000434793 351 ntBASIC15.1■□□□□ 0.01
CTSBP07858 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CTSBP07858 RN7SL692P-201ENST00000464677 288 ntBASIC15.1■□□□□ 0.01
CTSBP07858 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CTSBP07858 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CTSBP07858 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CTSBP07858 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.1■□□□□ 0.01
CTSBP07858 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.1■□□□□ 0.01
CTSBP07858 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.1■□□□□ 0.01
CTSBP07858 AC005225.4-201ENST00000557330 545 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms