Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.27■□□□□ 0.68
APPP05067 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.27■□□□□ 0.68
APPP05067 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
APPP05067 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
APPP05067 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
APPP05067 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APPP05067 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
APPP05067 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.27■□□□□ 0.68
APPP05067 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
APPP05067 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
APPP05067 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APPP05067 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APPP05067 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
APPP05067 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
APPP05067 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APPP05067 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
APPP05067 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
APPP05067 HAUS4P1-201ENST00000406739 1145 ntBASIC19.27■□□□□ 0.68
APPP05067 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
APPP05067 BASP1P1-201ENST00000430708 665 ntBASIC19.27■□□□□ 0.68
APPP05067 HMGN1P19-201ENST00000436976 333 ntBASIC19.27■□□□□ 0.68
APPP05067 AC245100.5-201ENST00000452108 331 ntBASIC19.27■□□□□ 0.68
APPP05067 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.27■□□□□ 0.68
APPP05067 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.27■□□□□ 0.68
APPP05067 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
APPP05067 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APPP05067 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
APPP05067 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
APPP05067 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.27■□□□□ 0.68
APPP05067 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
APPP05067 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
APPP05067 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.27■□□□□ 0.68
APPP05067 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.27■□□□□ 0.67
APPP05067 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
APPP05067 MTHFR-217ENST00000641820 1569 ntBASIC19.27■□□□□ 0.67
APPP05067 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
APPP05067 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
APPP05067 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
APPP05067 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
APPP05067 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.26■□□□□ 0.67
APPP05067 AL691432.1-201ENST00000596308 1422 ntBASIC19.26■□□□□ 0.67
APPP05067 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APPP05067 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.26■□□□□ 0.67
APPP05067 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.26■□□□□ 0.67
APPP05067 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
APPP05067 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APPP05067 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
APPP05067 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
APPP05067 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APPP05067 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APPP05067 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APPP05067 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.26■□□□□ 0.67
APPP05067 AL512638.1-201ENST00000457493 794 ntBASIC19.26■□□□□ 0.67
APPP05067 HLA-V-204ENST00000476601 1289 ntBASIC19.26■□□□□ 0.67
APPP05067 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
APPP05067 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.26■□□□□ 0.67
APPP05067 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.26■□□□□ 0.67
APPP05067 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.26■□□□□ 0.67
APPP05067 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
APPP05067 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APPP05067 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APPP05067 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
APPP05067 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.26■□□□□ 0.67
APPP05067 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
APPP05067 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
APPP05067 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APPP05067 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
APPP05067 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
APPP05067 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
APPP05067 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
APPP05067 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
APPP05067 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
APPP05067 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
APPP05067 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC19.25■□□□□ 0.67
APPP05067 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
APPP05067 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APPP05067 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APPP05067 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
APPP05067 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
APPP05067 CYP4F24P-201ENST00000586049 1580 ntBASIC19.25■□□□□ 0.67
APPP05067 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.25■□□□□ 0.67
APPP05067 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.25■□□□□ 0.67
APPP05067 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
APPP05067 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
APPP05067 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.25■□□□□ 0.67
APPP05067 AC243562.2-201ENST00000561247 970 ntBASIC19.25■□□□□ 0.67
APPP05067 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.25■□□□□ 0.67
APPP05067 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APPP05067 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
APPP05067 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APPP05067 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APPP05067 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
APPP05067 AP003680.1-201ENST00000598970 3660 ntBASIC19.25■□□□□ 0.67
APPP05067 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APPP05067 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APPP05067 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APPP05067 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APPP05067 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
APPP05067 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
APPP05067 AC100757.3-201ENST00000622361 1406 ntBASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms