Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 AC109635.5-201ENST00000533593 962 ntBASIC14.48□□□□□ -0.09
HLA-DQA2P01906 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 SLC25A6P4-201ENST00000586535 553 ntBASIC14.48□□□□□ -0.09
HLA-DQA2P01906 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 AC104109.2-201ENST00000602919 1418 ntBASIC14.48□□□□□ -0.09
HLA-DQA2P01906 AC025580.3-201ENST00000617932 1424 ntBASIC14.48□□□□□ -0.09
HLA-DQA2P01906 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
HLA-DQA2P01906 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 DBET-201ENST00000630918 3363 ntBASIC14.47□□□□□ -0.09
HLA-DQA2P01906 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 RHOQP3-201ENST00000437982 621 ntBASIC14.47□□□□□ -0.09
HLA-DQA2P01906 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 AC093724.1-201ENST00000448659 1027 ntBASIC14.47□□□□□ -0.09
HLA-DQA2P01906 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 AC018845.2-201ENST00000568326 409 ntBASIC14.47□□□□□ -0.09
HLA-DQA2P01906 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 AC004877.2-201ENST00000623941 599 ntBASIC14.47□□□□□ -0.09
HLA-DQA2P01906 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 AC067750.1-201ENST00000608826 6545 ntBASIC14.47□□□□□ -0.09
HLA-DQA2P01906 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA2P01906 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DQA2P01906 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.46□□□□□ -0.09
HLA-DQA2P01906 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DQA2P01906 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.46□□□□□ -0.09
HLA-DQA2P01906 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 373.8 ms