Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DRAP01903 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.22■□□□□ 0.35
HLA-DRAP01903 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.22■□□□□ 0.35
HLA-DRAP01903 AC069120.2-201ENST00000524091 540 ntBASIC17.22■□□□□ 0.35
HLA-DRAP01903 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.22■□□□□ 0.35
HLA-DRAP01903 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.22■□□□□ 0.35
HLA-DRAP01903 AL138828.2-201ENST00000615812 383 ntBASIC17.22■□□□□ 0.35
HLA-DRAP01903 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DRAP01903 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
HLA-DRAP01903 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DRAP01903 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.22■□□□□ 0.35
HLA-DRAP01903 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.22■□□□□ 0.35
HLA-DRAP01903 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DRAP01903 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.22■□□□□ 0.35
HLA-DRAP01903 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DRAP01903 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
HLA-DRAP01903 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DRAP01903 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DRAP01903 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DRAP01903 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DRAP01903 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DRAP01903 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DRAP01903 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
HLA-DRAP01903 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
HLA-DRAP01903 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
HLA-DRAP01903 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DRAP01903 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DRAP01903 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DRAP01903 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DRAP01903 AC132872.4-202ENST00000622924 2756 ntBASIC17.21■□□□□ 0.35
HLA-DRAP01903 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DRAP01903 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DRAP01903 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DRAP01903 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DRAP01903 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
HLA-DRAP01903 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
HLA-DRAP01903 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
HLA-DRAP01903 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DRAP01903 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
HLA-DRAP01903 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DRAP01903 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DRAP01903 PMS2P2-201ENST00000425039 1128 ntBASIC17.21■□□□□ 0.35
HLA-DRAP01903 PHKG1P2-201ENST00000457537 863 ntBASIC17.21■□□□□ 0.35
HLA-DRAP01903 HLA-V-204ENST00000476601 1289 ntBASIC17.21■□□□□ 0.35
HLA-DRAP01903 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DRAP01903 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.21■□□□□ 0.35
HLA-DRAP01903 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.21■□□□□ 0.35
HLA-DRAP01903 DUX4L27-201ENST00000554796 1261 ntBASIC17.21■□□□□ 0.35
HLA-DRAP01903 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.21■□□□□ 0.35
HLA-DRAP01903 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.21■□□□□ 0.35
HLA-DRAP01903 AL450472.2-201ENST00000603663 1156 ntBASIC17.21■□□□□ 0.35
HLA-DRAP01903 AC106028.4-201ENST00000614509 607 ntBASIC17.21■□□□□ 0.35
HLA-DRAP01903 AC073592.8-201ENST00000624126 511 ntBASIC17.21■□□□□ 0.35
HLA-DRAP01903 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
HLA-DRAP01903 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DRAP01903 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.21■□□□□ 0.34
HLA-DRAP01903 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
HLA-DRAP01903 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.21■□□□□ 0.34
HLA-DRAP01903 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HLA-DRAP01903 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.21■□□□□ 0.34
HLA-DRAP01903 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DRAP01903 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.2■□□□□ 0.34
HLA-DRAP01903 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.2■□□□□ 0.34
HLA-DRAP01903 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DRAP01903 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DRAP01903 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
HLA-DRAP01903 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DRAP01903 FO538757.1-201ENST00000623083 1397 ntBASIC17.2■□□□□ 0.34
HLA-DRAP01903 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DRAP01903 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.2■□□□□ 0.34
HLA-DRAP01903 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.2■□□□□ 0.34
HLA-DRAP01903 TREML5P-201ENST00000421694 576 ntBASIC17.2■□□□□ 0.34
HLA-DRAP01903 AC092580.3-201ENST00000430932 139 ntBASIC17.2■□□□□ 0.34
HLA-DRAP01903 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.2■□□□□ 0.34
HLA-DRAP01903 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.2■□□□□ 0.34
HLA-DRAP01903 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.2■□□□□ 0.34
HLA-DRAP01903 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.2■□□□□ 0.34
HLA-DRAP01903 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.2■□□□□ 0.34
HLA-DRAP01903 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DRAP01903 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DRAP01903 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DRAP01903 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DRAP01903 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.19■□□□□ 0.34
HLA-DRAP01903 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DRAP01903 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.19■□□□□ 0.34
HLA-DRAP01903 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DRAP01903 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.19■□□□□ 0.34
HLA-DRAP01903 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DRAP01903 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.19■□□□□ 0.34
HLA-DRAP01903 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DRAP01903 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
HLA-DRAP01903 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DRAP01903 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HLA-DRAP01903 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DRAP01903 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.19■□□□□ 0.34
HLA-DRAP01903 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.19■□□□□ 0.34
HLA-DRAP01903 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DRAP01903 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HLA-DRAP01903 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.19■□□□□ 0.34
HLA-DRAP01903 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms