Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TOMM40O96008 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TOMM40O96008 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TOMM40O96008 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TOMM40O96008 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TOMM40O96008 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TOMM40O96008 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TOMM40O96008 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.63□□□□□ -0.39
TOMM40O96008 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TOMM40O96008 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TOMM40O96008 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
TOMM40O96008 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TOMM40O96008 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
TOMM40O96008 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TOMM40O96008 CSF3-203ENST00000394148 622 ntTSL 3 BASIC12.63□□□□□ -0.39
TOMM40O96008 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.63□□□□□ -0.39
TOMM40O96008 RHOQP3-201ENST00000437982 621 ntBASIC12.63□□□□□ -0.39
TOMM40O96008 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.63□□□□□ -0.39
TOMM40O96008 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TOMM40O96008 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
TOMM40O96008 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC12.63□□□□□ -0.39
TOMM40O96008 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.63□□□□□ -0.39
TOMM40O96008 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC12.63□□□□□ -0.39
TOMM40O96008 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
TOMM40O96008 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.63□□□□□ -0.39
TOMM40O96008 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TOMM40O96008 AC023141.13-201ENST00000604991 943 ntBASIC12.63□□□□□ -0.39
TOMM40O96008 AL078644.1-201ENST00000609881 752 ntBASIC12.63□□□□□ -0.39
TOMM40O96008 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.63□□□□□ -0.39
TOMM40O96008 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.63□□□□□ -0.39
TOMM40O96008 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TOMM40O96008 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TOMM40O96008 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.63□□□□□ -0.39
TOMM40O96008 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC12.63□□□□□ -0.39
TOMM40O96008 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TOMM40O96008 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TOMM40O96008 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC12.63□□□□□ -0.39
TOMM40O96008 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TOMM40O96008 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TOMM40O96008 ING5-213ENST00000636051 4199 ntTSL 5 BASIC12.63□□□□□ -0.39
TOMM40O96008 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
TOMM40O96008 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.63□□□□□ -0.39
TOMM40O96008 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TOMM40O96008 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TOMM40O96008 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TOMM40O96008 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TOMM40O96008 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TOMM40O96008 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TOMM40O96008 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.63□□□□□ -0.39
TOMM40O96008 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC12.63□□□□□ -0.39
TOMM40O96008 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TOMM40O96008 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TOMM40O96008 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TOMM40O96008 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
TOMM40O96008 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TOMM40O96008 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.62□□□□□ -0.39
TOMM40O96008 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TOMM40O96008 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TOMM40O96008 AC013268.4-201ENST00000637413 2228 ntBASIC12.62□□□□□ -0.39
TOMM40O96008 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TOMM40O96008 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TOMM40O96008 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TOMM40O96008 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TOMM40O96008 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TOMM40O96008 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TOMM40O96008 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TOMM40O96008 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.62□□□□□ -0.39
TOMM40O96008 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TOMM40O96008 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
TOMM40O96008 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.62□□□□□ -0.39
TOMM40O96008 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TOMM40O96008 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TOMM40O96008 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TOMM40O96008 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TOMM40O96008 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
TOMM40O96008 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TOMM40O96008 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TOMM40O96008 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
TOMM40O96008 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TOMM40O96008 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.62□□□□□ -0.39
TOMM40O96008 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TOMM40O96008 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.62□□□□□ -0.39
TOMM40O96008 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
TOMM40O96008 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TOMM40O96008 AL450487.1-201ENST00000426799 995 ntBASIC12.62□□□□□ -0.39
TOMM40O96008 RNA5SP415-201ENST00000517246 115 ntBASIC12.62□□□□□ -0.39
TOMM40O96008 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC12.62□□□□□ -0.39
TOMM40O96008 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
TOMM40O96008 AP001005.1-201ENST00000571755 1248 ntBASIC12.62□□□□□ -0.39
TOMM40O96008 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
TOMM40O96008 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.62□□□□□ -0.39
TOMM40O96008 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TOMM40O96008 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TOMM40O96008 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.62□□□□□ -0.39
TOMM40O96008 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TOMM40O96008 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
TOMM40O96008 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
TOMM40O96008 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TOMM40O96008 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TOMM40O96008 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms