Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC23.54■■□□□ 1.36
RAPGEF3O95398 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
RAPGEF3O95398 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
RAPGEF3O95398 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC23.54■■□□□ 1.36
RAPGEF3O95398 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC23.54■■□□□ 1.36
RAPGEF3O95398 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC23.54■■□□□ 1.36
RAPGEF3O95398 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RAPGEF3O95398 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC23.54■■□□□ 1.36
RAPGEF3O95398 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RAPGEF3O95398 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
RAPGEF3O95398 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RAPGEF3O95398 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC23.53■■□□□ 1.36
RAPGEF3O95398 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RAPGEF3O95398 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC23.53■■□□□ 1.36
RAPGEF3O95398 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RAPGEF3O95398 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC23.53■■□□□ 1.36
RAPGEF3O95398 AL627389.1-201ENST00000413508 1182 ntBASIC23.53■■□□□ 1.36
RAPGEF3O95398 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC23.53■■□□□ 1.36
RAPGEF3O95398 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
RAPGEF3O95398 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC23.53■■□□□ 1.36
RAPGEF3O95398 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
RAPGEF3O95398 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
RAPGEF3O95398 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC23.53■■□□□ 1.36
RAPGEF3O95398 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RAPGEF3O95398 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC23.53■■□□□ 1.36
RAPGEF3O95398 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC23.53■■□□□ 1.36
RAPGEF3O95398 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RAPGEF3O95398 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RAPGEF3O95398 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC23.52■■□□□ 1.36
RAPGEF3O95398 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RAPGEF3O95398 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RAPGEF3O95398 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
RAPGEF3O95398 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RAPGEF3O95398 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC23.52■■□□□ 1.36
RAPGEF3O95398 DPM3-202ENST00000368399 517 ntBASIC23.52■■□□□ 1.36
RAPGEF3O95398 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC23.52■■□□□ 1.36
RAPGEF3O95398 AL133267.1-201ENST00000398220 340 ntBASIC23.52■■□□□ 1.36
RAPGEF3O95398 NDUFAB1P1-201ENST00000404262 460 ntBASIC23.52■■□□□ 1.36
RAPGEF3O95398 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RAPGEF3O95398 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC23.52■■□□□ 1.36
RAPGEF3O95398 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC23.52■■□□□ 1.36
RAPGEF3O95398 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC23.52■■□□□ 1.36
RAPGEF3O95398 WDR7-208ENST00000589935 544 ntTSL 4 BASIC23.52■■□□□ 1.36
RAPGEF3O95398 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC23.52■■□□□ 1.36
RAPGEF3O95398 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RAPGEF3O95398 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RAPGEF3O95398 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC23.52■■□□□ 1.36
RAPGEF3O95398 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
RAPGEF3O95398 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
RAPGEF3O95398 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC23.52■■□□□ 1.36
RAPGEF3O95398 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RAPGEF3O95398 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RAPGEF3O95398 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RAPGEF3O95398 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RAPGEF3O95398 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC23.51■■□□□ 1.35
RAPGEF3O95398 AP001282.1-201ENST00000531301 1499 ntBASIC23.51■■□□□ 1.35
RAPGEF3O95398 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
RAPGEF3O95398 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
RAPGEF3O95398 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RAPGEF3O95398 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC23.51■■□□□ 1.35
RAPGEF3O95398 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RAPGEF3O95398 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RAPGEF3O95398 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RAPGEF3O95398 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC23.51■■□□□ 1.35
RAPGEF3O95398 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RAPGEF3O95398 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
RAPGEF3O95398 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC23.51■■□□□ 1.35
RAPGEF3O95398 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC23.51■■□□□ 1.35
RAPGEF3O95398 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC23.51■■□□□ 1.35
RAPGEF3O95398 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC23.51■■□□□ 1.35
RAPGEF3O95398 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC23.51■■□□□ 1.35
RAPGEF3O95398 RN7SL818P-201ENST00000485099 259 ntBASIC23.51■■□□□ 1.35
RAPGEF3O95398 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RAPGEF3O95398 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC23.51■■□□□ 1.35
RAPGEF3O95398 NPM1P43-201ENST00000558669 786 ntBASIC23.51■■□□□ 1.35
RAPGEF3O95398 TBCB-211ENST00000589996 724 ntTSL 3 BASIC23.51■■□□□ 1.35
RAPGEF3O95398 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC23.51■■□□□ 1.35
RAPGEF3O95398 RN7SL725P-201ENST00000606439 259 ntBASIC23.51■■□□□ 1.35
RAPGEF3O95398 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC23.51■■□□□ 1.35
RAPGEF3O95398 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC23.51■■□□□ 1.35
RAPGEF3O95398 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC23.51■■□□□ 1.35
RAPGEF3O95398 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RAPGEF3O95398 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RAPGEF3O95398 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC23.51■■□□□ 1.35
RAPGEF3O95398 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RAPGEF3O95398 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RAPGEF3O95398 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
RAPGEF3O95398 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RAPGEF3O95398 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RAPGEF3O95398 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC23.5■■□□□ 1.35
RAPGEF3O95398 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RAPGEF3O95398 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RAPGEF3O95398 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC23.5■■□□□ 1.35
RAPGEF3O95398 AC018892.3-201ENST00000623986 2499 ntBASIC23.5■■□□□ 1.35
RAPGEF3O95398 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RAPGEF3O95398 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RAPGEF3O95398 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
RAPGEF3O95398 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC23.5■■□□□ 1.35
RAPGEF3O95398 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
RAPGEF3O95398 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms