Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF4O60810 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF4O60810 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF4O60810 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF4O60810 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF4O60810 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF4O60810 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF4O60810 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF4O60810 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF4O60810 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.4■□□□□ 0.06
PRAMEF4O60810 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.4■□□□□ 0.06
PRAMEF4O60810 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.4■□□□□ 0.06
PRAMEF4O60810 KRT18P13-201ENST00000400056 1290 ntBASIC15.4■□□□□ 0.06
PRAMEF4O60810 HIST3H2BA-201ENST00000436555 524 ntBASIC15.4■□□□□ 0.06
PRAMEF4O60810 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PRAMEF4O60810 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.4■□□□□ 0.06
PRAMEF4O60810 MIR4453-201ENST00000584019 89 ntBASIC15.4■□□□□ 0.06
PRAMEF4O60810 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PRAMEF4O60810 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PRAMEF4O60810 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.4■□□□□ 0.06
PRAMEF4O60810 AC097359.3-201ENST00000603982 1210 ntBASIC15.4■□□□□ 0.06
PRAMEF4O60810 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.4■□□□□ 0.06
PRAMEF4O60810 AP001059.3-201ENST00000619053 235 ntBASIC15.4■□□□□ 0.06
PRAMEF4O60810 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.4■□□□□ 0.06
PRAMEF4O60810 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF4O60810 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.4■□□□□ 0.06
PRAMEF4O60810 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.4■□□□□ 0.06
PRAMEF4O60810 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PRAMEF4O60810 AC105250.1-201ENST00000509378 2057 ntBASIC15.4■□□□□ 0.06
PRAMEF4O60810 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
PRAMEF4O60810 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.4■□□□□ 0.06
PRAMEF4O60810 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PRAMEF4O60810 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF4O60810 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF4O60810 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF4O60810 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.4■□□□□ 0.06
PRAMEF4O60810 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PRAMEF4O60810 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF4O60810 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF4O60810 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.4■□□□□ 0.06
PRAMEF4O60810 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF4O60810 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF4O60810 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF4O60810 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF4O60810 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.39■□□□□ 0.05
PRAMEF4O60810 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF4O60810 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PRAMEF4O60810 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.39■□□□□ 0.05
PRAMEF4O60810 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF4O60810 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF4O60810 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF4O60810 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.39■□□□□ 0.05
PRAMEF4O60810 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.39■□□□□ 0.05
PRAMEF4O60810 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF4O60810 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF4O60810 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PRAMEF4O60810 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF4O60810 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF4O60810 AZGP1P1-201ENST00000411909 902 ntBASIC15.39■□□□□ 0.05
PRAMEF4O60810 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
PRAMEF4O60810 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF4O60810 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.39■□□□□ 0.05
PRAMEF4O60810 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.39■□□□□ 0.05
PRAMEF4O60810 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.39■□□□□ 0.05
PRAMEF4O60810 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.39■□□□□ 0.05
PRAMEF4O60810 AC109322.1-201ENST00000524499 1264 ntBASIC15.39■□□□□ 0.05
PRAMEF4O60810 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.39■□□□□ 0.05
PRAMEF4O60810 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF4O60810 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.39■□□□□ 0.05
PRAMEF4O60810 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF4O60810 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.39■□□□□ 0.05
PRAMEF4O60810 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.39■□□□□ 0.05
PRAMEF4O60810 AC003101.2-201ENST00000612557 442 ntBASIC15.39■□□□□ 0.05
PRAMEF4O60810 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF4O60810 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.39■□□□□ 0.05
PRAMEF4O60810 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF4O60810 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.39■□□□□ 0.05
PRAMEF4O60810 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF4O60810 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PRAMEF4O60810 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.39■□□□□ 0.05
PRAMEF4O60810 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.39■□□□□ 0.05
PRAMEF4O60810 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PRAMEF4O60810 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.39■□□□□ 0.05
PRAMEF4O60810 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.39■□□□□ 0.05
PRAMEF4O60810 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF4O60810 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEF4O60810 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.39■□□□□ 0.05
PRAMEF4O60810 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PRAMEF4O60810 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRAMEF4O60810 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRAMEF4O60810 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.38■□□□□ 0.05
PRAMEF4O60810 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRAMEF4O60810 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
PRAMEF4O60810 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRAMEF4O60810 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PRAMEF4O60810 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRAMEF4O60810 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PRAMEF4O60810 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRAMEF4O60810 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRAMEF4O60810 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms