Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL13O43927 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL13O43927 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CXCL13O43927 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL13O43927 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CXCL13O43927 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL13O43927 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.35□□□□□ -0.11
CXCL13O43927 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL13O43927 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL13O43927 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL13O43927 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CXCL13O43927 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL13O43927 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.35□□□□□ -0.11
CXCL13O43927 FLJ16779-201ENST00000612722 7638 ntBASIC14.35□□□□□ -0.11
CXCL13O43927 LINC02199-201ENST00000506655 2702 ntBASIC14.35□□□□□ -0.11
CXCL13O43927 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL13O43927 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL13O43927 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL13O43927 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL13O43927 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.35□□□□□ -0.11
CXCL13O43927 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.35□□□□□ -0.11
CXCL13O43927 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL13O43927 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.35□□□□□ -0.11
CXCL13O43927 AL512361.1-201ENST00000554200 418 ntBASIC14.35□□□□□ -0.11
CXCL13O43927 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL13O43927 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.35□□□□□ -0.11
CXCL13O43927 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.35□□□□□ -0.11
CXCL13O43927 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.35□□□□□ -0.11
CXCL13O43927 MIR6069-201ENST00000620069 79 ntBASIC14.35□□□□□ -0.11
CXCL13O43927 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL13O43927 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL13O43927 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
CXCL13O43927 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL13O43927 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.35□□□□□ -0.11
CXCL13O43927 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL13O43927 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.35□□□□□ -0.11
CXCL13O43927 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL13O43927 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL13O43927 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
CXCL13O43927 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CXCL13O43927 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL13O43927 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL13O43927 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.34□□□□□ -0.11
CXCL13O43927 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.34□□□□□ -0.11
CXCL13O43927 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL13O43927 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL13O43927 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL13O43927 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL13O43927 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.34□□□□□ -0.11
CXCL13O43927 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CXCL13O43927 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL13O43927 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CXCL13O43927 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CXCL13O43927 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL13O43927 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL13O43927 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL13O43927 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL13O43927 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL13O43927 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CXCL13O43927 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL13O43927 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL13O43927 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.34□□□□□ -0.11
CXCL13O43927 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CXCL13O43927 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL13O43927 AL844908.2-201ENST00000609461 460 ntBASIC14.34□□□□□ -0.11
CXCL13O43927 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.34□□□□□ -0.11
CXCL13O43927 AJ011932.1-201ENST00000621707 465 ntBASIC14.34□□□□□ -0.11
CXCL13O43927 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.34□□□□□ -0.11
CXCL13O43927 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.34□□□□□ -0.11
CXCL13O43927 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.34□□□□□ -0.11
CXCL13O43927 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL13O43927 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL13O43927 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL13O43927 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CXCL13O43927 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.34□□□□□ -0.11
CXCL13O43927 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL13O43927 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CXCL13O43927 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL13O43927 AC022144.1-201ENST00000602255 1580 ntBASIC14.34□□□□□ -0.11
CXCL13O43927 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CXCL13O43927 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CXCL13O43927 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL13O43927 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCL13O43927 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CXCL13O43927 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CXCL13O43927 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CXCL13O43927 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.33□□□□□ -0.11
CXCL13O43927 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CXCL13O43927 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.11
CXCL13O43927 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCL13O43927 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CXCL13O43927 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CXCL13O43927 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
CXCL13O43927 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCL13O43927 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCL13O43927 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.33□□□□□ -0.12
CXCL13O43927 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CXCL13O43927 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.33□□□□□ -0.12
CXCL13O43927 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.33□□□□□ -0.12
CXCL13O43927 UGT1A2P-201ENST00000454886 866 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms