Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
ACTN4O43707 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.99■□□□□ 0.47
ACTN4O43707 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ACTN4O43707 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
ACTN4O43707 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ACTN4O43707 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ACTN4O43707 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
ACTN4O43707 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
ACTN4O43707 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.99■□□□□ 0.47
ACTN4O43707 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.99■□□□□ 0.47
ACTN4O43707 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
ACTN4O43707 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.99■□□□□ 0.47
ACTN4O43707 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.99■□□□□ 0.47
ACTN4O43707 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.99■□□□□ 0.47
ACTN4O43707 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
ACTN4O43707 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.99■□□□□ 0.47
ACTN4O43707 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.99■□□□□ 0.47
ACTN4O43707 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.99■□□□□ 0.47
ACTN4O43707 C20orf181-201ENST00000623918 480 ntBASIC17.99■□□□□ 0.47
ACTN4O43707 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
ACTN4O43707 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ACTN4O43707 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
ACTN4O43707 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.99■□□□□ 0.47
ACTN4O43707 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
ACTN4O43707 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ACTN4O43707 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ACTN4O43707 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ACTN4O43707 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ACTN4O43707 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ACTN4O43707 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ACTN4O43707 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ACTN4O43707 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ACTN4O43707 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ACTN4O43707 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.99■□□□□ 0.47
ACTN4O43707 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ACTN4O43707 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.99■□□□□ 0.47
ACTN4O43707 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ACTN4O43707 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ACTN4O43707 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ACTN4O43707 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ACTN4O43707 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ACTN4O43707 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
ACTN4O43707 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ACTN4O43707 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ACTN4O43707 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.98■□□□□ 0.47
ACTN4O43707 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
ACTN4O43707 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ACTN4O43707 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ACTN4O43707 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ACTN4O43707 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.98■□□□□ 0.47
ACTN4O43707 AC004987.2-201ENST00000395959 1148 ntBASIC17.98■□□□□ 0.47
ACTN4O43707 AL022342.1-201ENST00000400363 863 ntBASIC17.98■□□□□ 0.47
ACTN4O43707 AC069335.1-201ENST00000489972 472 ntBASIC17.98■□□□□ 0.47
ACTN4O43707 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.98■□□□□ 0.47
ACTN4O43707 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.98■□□□□ 0.47
ACTN4O43707 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.98■□□□□ 0.47
ACTN4O43707 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ACTN4O43707 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ACTN4O43707 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ACTN4O43707 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.98■□□□□ 0.47
ACTN4O43707 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ACTN4O43707 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.98■□□□□ 0.47
ACTN4O43707 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.98■□□□□ 0.47
ACTN4O43707 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ACTN4O43707 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.98■□□□□ 0.47
ACTN4O43707 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ACTN4O43707 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.98■□□□□ 0.47
ACTN4O43707 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.98■□□□□ 0.47
ACTN4O43707 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
ACTN4O43707 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ACTN4O43707 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACTN4O43707 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACTN4O43707 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
ACTN4O43707 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACTN4O43707 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.97■□□□□ 0.47
ACTN4O43707 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ACTN4O43707 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ACTN4O43707 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.97■□□□□ 0.47
ACTN4O43707 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACTN4O43707 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ACTN4O43707 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ACTN4O43707 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ACTN4O43707 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
ACTN4O43707 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACTN4O43707 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACTN4O43707 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
ACTN4O43707 HLA-H-201ENST00000383620 1096 ntBASIC17.97■□□□□ 0.47
ACTN4O43707 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACTN4O43707 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.97■□□□□ 0.47
ACTN4O43707 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.97■□□□□ 0.47
ACTN4O43707 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.97■□□□□ 0.47
ACTN4O43707 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
ACTN4O43707 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
ACTN4O43707 TIMM8BP1-201ENST00000452384 211 ntBASIC17.97■□□□□ 0.47
ACTN4O43707 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.97■□□□□ 0.47
ACTN4O43707 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.97■□□□□ 0.47
ACTN4O43707 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.97■□□□□ 0.47
ACTN4O43707 KRT8P23-201ENST00000560090 1207 ntBASIC17.97■□□□□ 0.47
ACTN4O43707 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.97■□□□□ 0.47
ACTN4O43707 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms