Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SNAI2O43623 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC12.1□□□□□ -0.47
SNAI2O43623 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SNAI2O43623 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
SNAI2O43623 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SNAI2O43623 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SNAI2O43623 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC12.09□□□□□ -0.47
SNAI2O43623 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.09□□□□□ -0.47
SNAI2O43623 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SNAI2O43623 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SNAI2O43623 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC12.09□□□□□ -0.47
SNAI2O43623 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
SNAI2O43623 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SNAI2O43623 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SNAI2O43623 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC12.09□□□□□ -0.47
SNAI2O43623 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SNAI2O43623 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SNAI2O43623 AP002383.4-201ENST00000442518 975 ntBASIC12.09□□□□□ -0.47
SNAI2O43623 LINC00265-3P-201ENST00000447588 903 ntBASIC12.09□□□□□ -0.47
SNAI2O43623 AC087163.2-201ENST00000457299 853 ntBASIC12.09□□□□□ -0.47
SNAI2O43623 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SNAI2O43623 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC12.09□□□□□ -0.47
SNAI2O43623 AC074051.2-201ENST00000565115 352 ntBASIC12.09□□□□□ -0.47
SNAI2O43623 AP002414.4-201ENST00000589764 1148 ntBASIC12.09□□□□□ -0.47
SNAI2O43623 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC12.09□□□□□ -0.47
SNAI2O43623 AC007191.1-201ENST00000623179 2995 ntBASIC12.09□□□□□ -0.47
SNAI2O43623 PGM5P2-202ENST00000637225 1043 ntBASIC12.09□□□□□ -0.47
SNAI2O43623 AL022326.1-202ENST00000641533 845 ntBASIC12.09□□□□□ -0.47
SNAI2O43623 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.09□□□□□ -0.47
SNAI2O43623 PPT1-215ENST00000641471 2368 ntBASIC12.09□□□□□ -0.47
SNAI2O43623 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SNAI2O43623 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.09□□□□□ -0.47
SNAI2O43623 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.09□□□□□ -0.47
SNAI2O43623 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SNAI2O43623 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SNAI2O43623 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SNAI2O43623 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SNAI2O43623 AC016027.1-202ENST00000607927 1699 ntBASIC12.09□□□□□ -0.47
SNAI2O43623 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.09□□□□□ -0.47
SNAI2O43623 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SNAI2O43623 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.09□□□□□ -0.47
SNAI2O43623 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
SNAI2O43623 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
SNAI2O43623 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.09□□□□□ -0.47
SNAI2O43623 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SNAI2O43623 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.09□□□□□ -0.47
SNAI2O43623 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC12.09□□□□□ -0.47
SNAI2O43623 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
SNAI2O43623 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
SNAI2O43623 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
SNAI2O43623 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
SNAI2O43623 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
SNAI2O43623 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
SNAI2O43623 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SNAI2O43623 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SNAI2O43623 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SNAI2O43623 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SNAI2O43623 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SNAI2O43623 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
SNAI2O43623 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.08□□□□□ -0.48
SNAI2O43623 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SNAI2O43623 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
SNAI2O43623 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SNAI2O43623 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SNAI2O43623 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SNAI2O43623 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.08□□□□□ -0.48
SNAI2O43623 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC12.08□□□□□ -0.48
SNAI2O43623 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SNAI2O43623 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SNAI2O43623 GUK1-204ENST00000366721 689 ntTSL 3 BASIC12.08□□□□□ -0.48
SNAI2O43623 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SNAI2O43623 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC12.08□□□□□ -0.48
SNAI2O43623 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SNAI2O43623 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SNAI2O43623 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC12.08□□□□□ -0.48
SNAI2O43623 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SNAI2O43623 BET1L-206ENST00000486280 665 ntTSL 3 BASIC12.08□□□□□ -0.48
SNAI2O43623 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC12.08□□□□□ -0.48
SNAI2O43623 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC12.08□□□□□ -0.48
SNAI2O43623 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC12.08□□□□□ -0.48
SNAI2O43623 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC12.08□□□□□ -0.48
SNAI2O43623 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
SNAI2O43623 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC12.08□□□□□ -0.48
SNAI2O43623 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC12.08□□□□□ -0.48
SNAI2O43623 AC064862.7-201ENST00000604520 867 ntBASIC12.08□□□□□ -0.48
SNAI2O43623 LINC01023-201ENST00000606054 436 ntBASIC12.08□□□□□ -0.48
SNAI2O43623 AL589182.2-201ENST00000619332 1049 ntBASIC12.08□□□□□ -0.48
SNAI2O43623 CCNC-219ENST00000627680 896 ntTSL 5 BASIC12.08□□□□□ -0.48
SNAI2O43623 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.08□□□□□ -0.48
SNAI2O43623 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
SNAI2O43623 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.08□□□□□ -0.48
SNAI2O43623 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SNAI2O43623 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SNAI2O43623 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SNAI2O43623 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.08□□□□□ -0.48
SNAI2O43623 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SNAI2O43623 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SNAI2O43623 AP005117.1-201ENST00000584346 1413 ntBASIC12.08□□□□□ -0.48
SNAI2O43623 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.08□□□□□ -0.48
SNAI2O43623 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms