Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 YBX2P1-201ENST00000394192 760 ntBASIC14.28□□□□□ -0.12
SGCEO43556 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SGCEO43556 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.28□□□□□ -0.12
SGCEO43556 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SGCEO43556 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.28□□□□□ -0.12
SGCEO43556 TFAMP1-201ENST00000412727 736 ntBASIC14.28□□□□□ -0.12
SGCEO43556 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.28□□□□□ -0.12
SGCEO43556 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.28□□□□□ -0.12
SGCEO43556 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.28□□□□□ -0.12
SGCEO43556 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SGCEO43556 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SGCEO43556 RN7SL589P-201ENST00000481268 310 ntBASIC14.28□□□□□ -0.12
SGCEO43556 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
SGCEO43556 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.28□□□□□ -0.12
SGCEO43556 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.28□□□□□ -0.12
SGCEO43556 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SGCEO43556 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.28□□□□□ -0.12
SGCEO43556 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SGCEO43556 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.28□□□□□ -0.12
SGCEO43556 AL135744.1-201ENST00000565098 629 ntBASIC14.28□□□□□ -0.12
SGCEO43556 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.28□□□□□ -0.12
SGCEO43556 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.28□□□□□ -0.12
SGCEO43556 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.28□□□□□ -0.12
SGCEO43556 C20orf181-201ENST00000623918 480 ntBASIC14.28□□□□□ -0.12
SGCEO43556 AC092902.6-201ENST00000641783 218 ntBASIC14.28□□□□□ -0.12
SGCEO43556 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SGCEO43556 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SGCEO43556 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SGCEO43556 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SGCEO43556 CICP4-201ENST00000447359 2812 ntBASIC14.28□□□□□ -0.12
SGCEO43556 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SGCEO43556 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SGCEO43556 AC105917.1-201ENST00000506637 2539 ntBASIC14.28□□□□□ -0.12
SGCEO43556 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.27□□□□□ -0.12
SGCEO43556 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.27□□□□□ -0.12
SGCEO43556 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SGCEO43556 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.27□□□□□ -0.12
SGCEO43556 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SGCEO43556 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SGCEO43556 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.27□□□□□ -0.12
SGCEO43556 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SGCEO43556 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SGCEO43556 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SGCEO43556 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SGCEO43556 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SGCEO43556 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
SGCEO43556 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
SGCEO43556 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SGCEO43556 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SGCEO43556 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SGCEO43556 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.27□□□□□ -0.12
SGCEO43556 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SGCEO43556 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.27□□□□□ -0.12
SGCEO43556 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.27□□□□□ -0.12
SGCEO43556 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
SGCEO43556 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SGCEO43556 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SGCEO43556 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SGCEO43556 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.27□□□□□ -0.13
SGCEO43556 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SGCEO43556 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.27□□□□□ -0.13
SGCEO43556 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.27□□□□□ -0.13
SGCEO43556 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SGCEO43556 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.27□□□□□ -0.13
SGCEO43556 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.27□□□□□ -0.13
SGCEO43556 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
SGCEO43556 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.27□□□□□ -0.13
SGCEO43556 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SGCEO43556 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.27□□□□□ -0.13
SGCEO43556 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.27□□□□□ -0.13
SGCEO43556 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SGCEO43556 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.27□□□□□ -0.13
SGCEO43556 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SGCEO43556 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SGCEO43556 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SGCEO43556 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.27□□□□□ -0.13
SGCEO43556 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SGCEO43556 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.27□□□□□ -0.13
SGCEO43556 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SGCEO43556 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SGCEO43556 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SGCEO43556 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SGCEO43556 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SGCEO43556 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SGCEO43556 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SGCEO43556 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SGCEO43556 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SGCEO43556 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.26□□□□□ -0.13
SGCEO43556 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.26□□□□□ -0.13
SGCEO43556 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SGCEO43556 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.26□□□□□ -0.13
SGCEO43556 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SGCEO43556 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SGCEO43556 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SGCEO43556 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SGCEO43556 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SGCEO43556 AL589702.1-201ENST00000641229 1509 ntBASIC14.26□□□□□ -0.13
SGCEO43556 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.26□□□□□ -0.13
SGCEO43556 AC024909.3-201ENST00000611513 2257 ntBASIC14.26□□□□□ -0.13
SGCEO43556 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms