Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TO15178 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TO15178 PCDHA1-201ENST00000378133 2726 ntBASIC14.79□□□□□ -0.04
TO15178 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TO15178 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TO15178 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TO15178 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TO15178 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TO15178 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.79□□□□□ -0.04
TO15178 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TO15178 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TO15178 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.79□□□□□ -0.04
TO15178 AL080243.2-201ENST00000418783 582 ntBASIC14.79□□□□□ -0.04
TO15178 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.79□□□□□ -0.04
TO15178 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.79□□□□□ -0.04
TO15178 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.79□□□□□ -0.04
TO15178 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.79□□□□□ -0.04
TO15178 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.79□□□□□ -0.04
TO15178 RFPL4AP1-201ENST00000530883 850 ntBASIC14.79□□□□□ -0.04
TO15178 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.79□□□□□ -0.04
TO15178 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TO15178 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.79□□□□□ -0.04
TO15178 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.79□□□□□ -0.04
TO15178 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.79□□□□□ -0.04
TO15178 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.79□□□□□ -0.04
TO15178 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TO15178 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.79□□□□□ -0.04
TO15178 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.79□□□□□ -0.04
TO15178 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TO15178 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.79□□□□□ -0.04
TO15178 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.79□□□□□ -0.04
TO15178 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.79□□□□□ -0.04
TO15178 SPDYE12P-201ENST00000618416 771 ntBASIC14.79□□□□□ -0.04
TO15178 AC073592.8-201ENST00000624126 511 ntBASIC14.79□□□□□ -0.04
TO15178 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TO15178 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TO15178 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.79□□□□□ -0.04
TO15178 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TO15178 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TO15178 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TO15178 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TO15178 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
TO15178 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.78□□□□□ -0.04
TO15178 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TO15178 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TO15178 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TO15178 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
TO15178 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TO15178 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.78□□□□□ -0.04
TO15178 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.78□□□□□ -0.04
TO15178 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.78□□□□□ -0.04
TO15178 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
TO15178 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.78□□□□□ -0.04
TO15178 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.78□□□□□ -0.04
TO15178 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TO15178 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TO15178 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
TO15178 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.78□□□□□ -0.04
TO15178 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
TO15178 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.78□□□□□ -0.04
TO15178 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.78□□□□□ -0.04
TO15178 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.78□□□□□ -0.04
TO15178 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TO15178 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.78□□□□□ -0.04
TO15178 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.78□□□□□ -0.04
TO15178 AL138828.2-201ENST00000615812 383 ntBASIC14.78□□□□□ -0.04
TO15178 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TO15178 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
TO15178 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
TO15178 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.78□□□□□ -0.04
TO15178 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.78□□□□□ -0.04
TO15178 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TO15178 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.78□□□□□ -0.04
TO15178 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TO15178 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TO15178 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
TO15178 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TO15178 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TO15178 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TO15178 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TO15178 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TO15178 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TO15178 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TO15178 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
TO15178 AL365203.3-201ENST00000609742 2057 ntBASIC14.77□□□□□ -0.04
TO15178 REXO1L1P-202ENST00000608646 1974 ntBASIC14.77□□□□□ -0.04
TO15178 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TO15178 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.77□□□□□ -0.04
TO15178 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.77□□□□□ -0.04
TO15178 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
TO15178 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.77□□□□□ -0.05
TO15178 RPL37AP1-201ENST00000412502 279 ntBASIC14.77□□□□□ -0.05
TO15178 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.77□□□□□ -0.05
TO15178 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
TO15178 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.77□□□□□ -0.05
TO15178 HIST3H2BA-201ENST00000436555 524 ntBASIC14.77□□□□□ -0.05
TO15178 SERBP1P3-201ENST00000459980 809 ntBASIC14.77□□□□□ -0.05
TO15178 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TO15178 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.77□□□□□ -0.05
TO15178 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms