Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC126177.1-201ENST00000547829 2218 ntBASIC16.2■□□□□ 0.18
TRIM38O00635 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TRIM38O00635 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM38O00635 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TRIM38O00635 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM38O00635 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM38O00635 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.19■□□□□ 0.18
TRIM38O00635 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM38O00635 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.19■□□□□ 0.18
TRIM38O00635 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM38O00635 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM38O00635 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM38O00635 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.19■□□□□ 0.18
TRIM38O00635 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM38O00635 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM38O00635 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRIM38O00635 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM38O00635 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM38O00635 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TRIM38O00635 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM38O00635 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
TRIM38O00635 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM38O00635 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM38O00635 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.19■□□□□ 0.18
TRIM38O00635 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.19■□□□□ 0.18
TRIM38O00635 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM38O00635 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM38O00635 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.19■□□□□ 0.18
TRIM38O00635 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM38O00635 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM38O00635 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM38O00635 CRB3P1-201ENST00000449338 276 ntBASIC16.19■□□□□ 0.18
TRIM38O00635 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.19■□□□□ 0.18
TRIM38O00635 GAPDHP21-201ENST00000450301 1010 ntBASIC16.19■□□□□ 0.18
TRIM38O00635 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM38O00635 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM38O00635 KRT18P34-201ENST00000488218 1270 ntBASIC16.19■□□□□ 0.18
TRIM38O00635 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.19■□□□□ 0.18
TRIM38O00635 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.19■□□□□ 0.18
TRIM38O00635 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM38O00635 AC073389.1-201ENST00000595595 795 ntBASIC16.19■□□□□ 0.18
TRIM38O00635 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM38O00635 SPDYE12P-201ENST00000618416 771 ntBASIC16.19■□□□□ 0.18
TRIM38O00635 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM38O00635 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TRIM38O00635 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM38O00635 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM38O00635 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM38O00635 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.19■□□□□ 0.18
TRIM38O00635 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.19■□□□□ 0.18
TRIM38O00635 AC023824.1-201ENST00000562945 2975 ntBASIC16.19■□□□□ 0.18
TRIM38O00635 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM38O00635 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM38O00635 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM38O00635 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRIM38O00635 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM38O00635 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM38O00635 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM38O00635 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM38O00635 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM38O00635 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM38O00635 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM38O00635 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM38O00635 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM38O00635 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM38O00635 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.18■□□□□ 0.18
TRIM38O00635 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM38O00635 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM38O00635 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM38O00635 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM38O00635 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRIM38O00635 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM38O00635 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM38O00635 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM38O00635 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM38O00635 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM38O00635 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.18■□□□□ 0.18
TRIM38O00635 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.18■□□□□ 0.18
TRIM38O00635 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM38O00635 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRIM38O00635 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.18■□□□□ 0.18
TRIM38O00635 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TRIM38O00635 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM38O00635 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM38O00635 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM38O00635 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM38O00635 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM38O00635 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.18■□□□□ 0.18
TRIM38O00635 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TRIM38O00635 FOXO1B-201ENST00000504678 1527 ntBASIC16.18■□□□□ 0.18
TRIM38O00635 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM38O00635 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM38O00635 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM38O00635 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM38O00635 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM38O00635 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM38O00635 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM38O00635 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM38O00635 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM38O00635 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms