Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
KPNA4O00629 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.11■□□□□ 0.01
KPNA4O00629 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.1■□□□□ 0.01
KPNA4O00629 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KPNA4O00629 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
KPNA4O00629 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
KPNA4O00629 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
KPNA4O00629 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KPNA4O00629 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KPNA4O00629 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.1■□□□□ 0.01
KPNA4O00629 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
KPNA4O00629 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
KPNA4O00629 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.1■□□□□ 0.01
KPNA4O00629 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.1■□□□□ 0.01
KPNA4O00629 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KPNA4O00629 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KPNA4O00629 AP005117.1-202ENST00000581724 1908 ntBASIC15.1■□□□□ 0.01
KPNA4O00629 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
KPNA4O00629 MYO15B-237ENST00000642007 4893 ntBASIC15.1■□□□□ 0.01
KPNA4O00629 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KPNA4O00629 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KPNA4O00629 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KPNA4O00629 RPS2P28-201ENST00000314255 741 ntBASIC15.1■□□□□ 0.01
KPNA4O00629 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KPNA4O00629 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KPNA4O00629 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.1■□□□□ 0.01
KPNA4O00629 HCG4-201ENST00000418983 998 ntBASIC15.1■□□□□ 0.01
KPNA4O00629 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KPNA4O00629 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.1■□□□□ 0.01
KPNA4O00629 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KPNA4O00629 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.1■□□□□ 0.01
KPNA4O00629 MIR4751-201ENST00000578027 74 ntBASIC15.1■□□□□ 0.01
KPNA4O00629 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.1■□□□□ 0.01
KPNA4O00629 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KPNA4O00629 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KPNA4O00629 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
KPNA4O00629 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.1■□□□□ 0.01
KPNA4O00629 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
KPNA4O00629 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
KPNA4O00629 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KPNA4O00629 AC010491.1-201ENST00000563101 2797 ntBASIC15.1■□□□□ 0.01
KPNA4O00629 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
KPNA4O00629 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KPNA4O00629 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KPNA4O00629 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KPNA4O00629 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.1■□□□□ 0.01
KPNA4O00629 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
KPNA4O00629 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
KPNA4O00629 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.1■□□□□ 0.01
KPNA4O00629 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KPNA4O00629 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KPNA4O00629 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KPNA4O00629 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.1■□□□□ 0.01
KPNA4O00629 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KPNA4O00629 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.09■□□□□ 0.01
KPNA4O00629 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
KPNA4O00629 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.09■□□□□ 0.01
KPNA4O00629 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KPNA4O00629 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
KPNA4O00629 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
KPNA4O00629 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KPNA4O00629 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KPNA4O00629 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KPNA4O00629 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
KPNA4O00629 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.09■□□□□ 0.01
KPNA4O00629 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.09■□□□□ 0.01
KPNA4O00629 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KPNA4O00629 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
KPNA4O00629 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KPNA4O00629 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KPNA4O00629 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
KPNA4O00629 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
KPNA4O00629 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
KPNA4O00629 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KPNA4O00629 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KPNA4O00629 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.09■□□□□ 0.01
KPNA4O00629 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.09■□□□□ 0.01
KPNA4O00629 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
KPNA4O00629 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
KPNA4O00629 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.09■□□□□ 0.01
KPNA4O00629 RN7SL510P-201ENST00000581311 263 ntBASIC15.09■□□□□ 0.01
KPNA4O00629 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.09■□□□□ 0.01
KPNA4O00629 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.09■□□□□ 0.01
KPNA4O00629 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KPNA4O00629 AL691432.3-201ENST00000621860 400 ntBASIC15.09■□□□□ 0.01
KPNA4O00629 FAM215A-202ENST00000632077 792 ntBASIC15.09■□□□□ 0.01
KPNA4O00629 PGM5P2-202ENST00000637225 1043 ntBASIC15.09■□□□□ 0.01
KPNA4O00629 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KPNA4O00629 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.09■□□□□ 0.01
KPNA4O00629 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KPNA4O00629 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KPNA4O00629 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KPNA4O00629 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.09■□□□□ 0.01
KPNA4O00629 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
KPNA4O00629 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
KPNA4O00629 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
KPNA4O00629 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KPNA4O00629 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
KPNA4O00629 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KPNA4O00629 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms