Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRRM4A7MD48 YBX2P1-201ENST00000394192 760 ntBASIC12.94□□□□□ -0.34
SRRM4A7MD48 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.94□□□□□ -0.34
SRRM4A7MD48 AL022342.1-201ENST00000400363 863 ntBASIC12.94□□□□□ -0.34
SRRM4A7MD48 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC12.94□□□□□ -0.34
SRRM4A7MD48 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SRRM4A7MD48 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC12.94□□□□□ -0.34
SRRM4A7MD48 AC079140.1-201ENST00000508039 487 ntBASIC12.94□□□□□ -0.34
SRRM4A7MD48 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.94□□□□□ -0.34
SRRM4A7MD48 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.94□□□□□ -0.34
SRRM4A7MD48 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.94□□□□□ -0.34
SRRM4A7MD48 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC12.94□□□□□ -0.34
SRRM4A7MD48 AP000842.3-202ENST00000569238 1080 ntBASIC12.94□□□□□ -0.34
SRRM4A7MD48 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12.94□□□□□ -0.34
SRRM4A7MD48 AC024267.1-201ENST00000582320 895 ntBASIC12.94□□□□□ -0.34
SRRM4A7MD48 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.94□□□□□ -0.34
SRRM4A7MD48 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRRM4A7MD48 AL671883.3-201ENST00000603274 991 ntBASIC12.94□□□□□ -0.34
SRRM4A7MD48 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.94□□□□□ -0.34
SRRM4A7MD48 AC026120.1-201ENST00000611536 926 ntBASIC12.94□□□□□ -0.34
SRRM4A7MD48 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.94□□□□□ -0.34
SRRM4A7MD48 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.94□□□□□ -0.34
SRRM4A7MD48 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
SRRM4A7MD48 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRRM4A7MD48 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC12.94□□□□□ -0.34
SRRM4A7MD48 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SRRM4A7MD48 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SRRM4A7MD48 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SRRM4A7MD48 PPT1-215ENST00000641471 2368 ntBASIC12.94□□□□□ -0.34
SRRM4A7MD48 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRRM4A7MD48 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRRM4A7MD48 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SRRM4A7MD48 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SRRM4A7MD48 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRRM4A7MD48 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRRM4A7MD48 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.94□□□□□ -0.34
SRRM4A7MD48 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SRRM4A7MD48 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRRM4A7MD48 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 SSR4P1-203ENST00000599569 2260 ntBASIC12.93□□□□□ -0.34
SRRM4A7MD48 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 AC022532.1-201ENST00000624563 1728 ntBASIC12.93□□□□□ -0.34
SRRM4A7MD48 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRRM4A7MD48 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRRM4A7MD48 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRRM4A7MD48 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRRM4A7MD48 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRRM4A7MD48 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRRM4A7MD48 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRRM4A7MD48 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SRRM4A7MD48 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRRM4A7MD48 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRRM4A7MD48 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SRRM4A7MD48 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRRM4A7MD48 AMT-233ENST00000636522 1620 ntTSL 2 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SRRM4A7MD48 AC004832.2-201ENST00000426397 482 ntBASIC12.93□□□□□ -0.34
SRRM4A7MD48 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 SPDYE11-202ENST00000450699 704 ntBASIC12.93□□□□□ -0.34
SRRM4A7MD48 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 RN7SL589P-201ENST00000481268 310 ntBASIC12.93□□□□□ -0.34
SRRM4A7MD48 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 SPDYE9P-201ENST00000570642 692 ntBASIC12.93□□□□□ -0.34
SRRM4A7MD48 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SRRM4A7MD48 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 SPDYE10P-202ENST00000612005 668 ntBASIC12.93□□□□□ -0.34
SRRM4A7MD48 SPDYE8P-202ENST00000612377 668 ntBASIC12.93□□□□□ -0.34
SRRM4A7MD48 C20orf181-201ENST00000623918 480 ntBASIC12.93□□□□□ -0.34
SRRM4A7MD48 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRRM4A7MD48 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRRM4A7MD48 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRRM4A7MD48 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 BNIP3P1-202ENST00000550043 1585 ntBASIC12.93□□□□□ -0.34
SRRM4A7MD48 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRRM4A7MD48 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.93□□□□□ -0.34
SRRM4A7MD48 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRRM4A7MD48 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms