Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 HNRNPUP1-201ENST00000554987 333 ntBASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
YJEFN3A6XGL0 AL365203.3-201ENST00000609742 2057 ntBASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 SDHAP3-202ENST00000515467 728 ntBASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 MIR4745-201ENST00000577608 62 ntBASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 AC097359.3-201ENST00000603982 1210 ntBASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
YJEFN3A6XGL0 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 AC074338.1-201ENST00000416825 156 ntBASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 TARDBPP1-201ENST00000442013 1203 ntBASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 SPDYE18-201ENST00000510091 1050 ntBASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 AC135586.1-201ENST00000539323 574 ntBASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 RN7SL204P-201ENST00000582831 262 ntBASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 Z97205.2-201ENST00000564697 1639 ntBASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 BTBD7P1-201ENST00000447253 1453 ntBASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
YJEFN3A6XGL0 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms