Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
HFM1A2PYH4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
HFM1A2PYH4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HFM1A2PYH4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HFM1A2PYH4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
HFM1A2PYH4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC23.36■■□□□ 1.33
HFM1A2PYH4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC23.36■■□□□ 1.33
HFM1A2PYH4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HFM1A2PYH4 AC009090.5-201ENST00000624886 2285 ntBASIC23.36■■□□□ 1.33
HFM1A2PYH4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
HFM1A2PYH4 AC079776.1-201ENST00000401540 1152 ntBASIC23.36■■□□□ 1.33
HFM1A2PYH4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC23.36■■□□□ 1.33
HFM1A2PYH4 ARSEP1-201ENST00000420443 635 ntBASIC23.36■■□□□ 1.33
HFM1A2PYH4 KRT17P7-201ENST00000451704 1104 ntBASIC23.36■■□□□ 1.33
HFM1A2PYH4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
HFM1A2PYH4 AC104596.2-201ENST00000512793 793 ntBASIC23.36■■□□□ 1.33
HFM1A2PYH4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC23.36■■□□□ 1.33
HFM1A2PYH4 AL359711.2-201ENST00000563105 872 ntBASIC23.36■■□□□ 1.33
HFM1A2PYH4 MIR5189-201ENST00000577370 114 ntBASIC23.36■■□□□ 1.33
HFM1A2PYH4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HFM1A2PYH4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC23.36■■□□□ 1.33
HFM1A2PYH4 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HFM1A2PYH4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
HFM1A2PYH4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
HFM1A2PYH4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC23.36■■□□□ 1.33
HFM1A2PYH4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HFM1A2PYH4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HFM1A2PYH4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HFM1A2PYH4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
HFM1A2PYH4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
HFM1A2PYH4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
HFM1A2PYH4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
HFM1A2PYH4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HFM1A2PYH4 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
HFM1A2PYH4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC23.36■■□□□ 1.33
HFM1A2PYH4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC23.35■■□□□ 1.33
HFM1A2PYH4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
HFM1A2PYH4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
HFM1A2PYH4 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
HFM1A2PYH4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC23.35■■□□□ 1.33
HFM1A2PYH4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
HFM1A2PYH4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC23.35■■□□□ 1.33
HFM1A2PYH4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC23.35■■□□□ 1.33
HFM1A2PYH4 RN7SL752P-201ENST00000463779 287 ntBASIC23.35■■□□□ 1.33
HFM1A2PYH4 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
HFM1A2PYH4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC23.35■■□□□ 1.33
HFM1A2PYH4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC23.35■■□□□ 1.33
HFM1A2PYH4 DRD5P1-201ENST00000456605 1438 ntBASIC23.35■■□□□ 1.33
HFM1A2PYH4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
HFM1A2PYH4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
HFM1A2PYH4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
HFM1A2PYH4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
HFM1A2PYH4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
HFM1A2PYH4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
HFM1A2PYH4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
HFM1A2PYH4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC23.35■■□□□ 1.33
HFM1A2PYH4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
HFM1A2PYH4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC23.35■■□□□ 1.33
HFM1A2PYH4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC23.34■■□□□ 1.33
HFM1A2PYH4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
HFM1A2PYH4 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
HFM1A2PYH4 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC23.34■■□□□ 1.33
HFM1A2PYH4 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC23.34■■□□□ 1.33
HFM1A2PYH4 AL162726.2-201ENST00000438986 1017 ntBASIC23.34■■□□□ 1.33
HFM1A2PYH4 ATP5G2P4-201ENST00000442175 420 ntBASIC23.34■■□□□ 1.33
HFM1A2PYH4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
HFM1A2PYH4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC23.34■■□□□ 1.33
HFM1A2PYH4 HNRNPA1P13-201ENST00000510646 963 ntBASIC23.34■■□□□ 1.33
HFM1A2PYH4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
HFM1A2PYH4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC23.34■■□□□ 1.33
HFM1A2PYH4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
HFM1A2PYH4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
HFM1A2PYH4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
HFM1A2PYH4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
HFM1A2PYH4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
HFM1A2PYH4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
HFM1A2PYH4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
HFM1A2PYH4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
HFM1A2PYH4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC23.34■■□□□ 1.33
HFM1A2PYH4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
HFM1A2PYH4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
HFM1A2PYH4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
HFM1A2PYH4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
HFM1A2PYH4 RPL13AP25-201ENST00000484130 612 ntBASIC23.33■■□□□ 1.33
HFM1A2PYH4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC23.33■■□□□ 1.33
HFM1A2PYH4 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC23.33■■□□□ 1.33
HFM1A2PYH4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
HFM1A2PYH4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
HFM1A2PYH4 AC127383.1-201ENST00000444697 1800 ntBASIC23.33■■□□□ 1.33
HFM1A2PYH4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
HFM1A2PYH4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
HFM1A2PYH4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
HFM1A2PYH4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
HFM1A2PYH4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC23.33■■□□□ 1.32
HFM1A2PYH4 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC23.33■■□□□ 1.32
HFM1A2PYH4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
HFM1A2PYH4 AC079328.2-201ENST00000561241 3354 ntBASIC23.33■■□□□ 1.32
HFM1A2PYH4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
HFM1A2PYH4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
HFM1A2PYH4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms