Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 AC009477.1-201ENST00000452936 217 ntBASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 PAUPAR-201ENST00000630360 2965 ntBASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 CICP13-201ENST00000422015 2789 ntBASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV5-4A0A0C4DH59 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 AC105250.1-201ENST00000509378 2057 ntBASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 CYMP-203ENST00000474680 1263 ntBASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 AC020658.6-201ENST00000623564 1870 ntBASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRBV5-4A0A0C4DH59 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV5-4A0A0C4DH59 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
TRBV5-4A0A0C4DH59 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV5-4A0A0C4DH59 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms