Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 AKR1C7P-201ENST00000305623 895 ntBASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 RNU1-129P-201ENST00000384064 167 ntBASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 HIST2H3DP1-201ENST00000401004 416 ntBASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 HMGA1P7-201ENST00000406908 502 ntBASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 MIR1224-201ENST00000408193 85 ntBASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 IGHV3-65-201ENST00000523210 341 ntBASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 U1.21-201ENST00000580816 167 ntBASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 MIR4515-201ENST00000584082 81 ntBASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 AC021097.1-201ENST00000607902 574 ntBASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 REXO1L6P-202ENST00000619970 1078 ntBASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 AC091951.1-201ENST00000512854 2465 ntBASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.52□□□□□ -0.4
TRAV5A0A0B4J249 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TRAV5A0A0B4J249 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
TRAV5A0A0B4J249 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRAV5A0A0B4J249 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
TRAV5A0A0B4J249 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRAV5A0A0B4J249 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRAV5A0A0B4J249 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TRAV5A0A0B4J249 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC12.52□□□□□ -0.4
TRAV5A0A0B4J249 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 AF238378.1-201ENST00000526806 358 ntBASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 OR7E14P-202ENST00000530490 1290 ntBASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 OR7E47P-204ENST00000575924 449 ntBASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 AL031055.1-201ENST00000606362 631 ntBASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 ACTL9-202ENST00000612068 1252 ntBASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
TRAV5A0A0B4J249 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms