Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 TERF1P5-201ENST00000477545 1207 ntBASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 PNN-205ENST00000556530 601 ntTSL 2 BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 AC124016.1-201ENST00000609552 612 ntBASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
LINC01558Q9Y6Z2 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 TSN-212ENST00000536142 3328 ntTSL 2 BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 GOLGA8VP-201ENST00000559009 1798 ntBASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 AC015802.1-201ENST00000588104 1449 ntBASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 USO1-201ENST00000264904 4135 ntTSL 2 BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 GPX1P1-201ENST00000388829 606 ntBASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 KRT16P3-201ENST00000439127 1283 ntBASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 AD001527.2-201ENST00000622994 785 ntBASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
LINC01558Q9Y6Z2 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms