Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAI2Q9Y5P3 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.25■□□□□ 0.19
RAI2Q9Y5P3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAI2Q9Y5P3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.25■□□□□ 0.19
RAI2Q9Y5P3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.25■□□□□ 0.19
RAI2Q9Y5P3 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.25■□□□□ 0.19
RAI2Q9Y5P3 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.25■□□□□ 0.19
RAI2Q9Y5P3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAI2Q9Y5P3 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAI2Q9Y5P3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.25■□□□□ 0.19
RAI2Q9Y5P3 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.25■□□□□ 0.19
RAI2Q9Y5P3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.25■□□□□ 0.19
RAI2Q9Y5P3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.25■□□□□ 0.19
RAI2Q9Y5P3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAI2Q9Y5P3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAI2Q9Y5P3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.25■□□□□ 0.19
RAI2Q9Y5P3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RAI2Q9Y5P3 LINC02447-202ENST00000501888 2146 ntBASIC16.25■□□□□ 0.19
RAI2Q9Y5P3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RAI2Q9Y5P3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAI2Q9Y5P3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.25■□□□□ 0.19
RAI2Q9Y5P3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAI2Q9Y5P3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAI2Q9Y5P3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAI2Q9Y5P3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 AC107890.1-201ENST00000422478 521 ntBASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAI2Q9Y5P3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 AC010491.1-201ENST00000563101 2797 ntBASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 AC018695.7-201ENST00000624587 2492 ntBASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 BNIP3P1-202ENST00000550043 1585 ntBASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 AC140878.1-201ENST00000565277 250 ntBASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 AC084346.2-201ENST00000607097 949 ntBASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 AL589739.1-201ENST00000607720 493 ntBASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms