Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 KRT8P12-202ENST00000472924 1397 ntBASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 AL080243.2-201ENST00000418783 582 ntBASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 TEX28P1-201ENST00000613479 1221 ntBASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 TEX28P2-201ENST00000617764 1221 ntBASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 AL390754.1-201ENST00000619088 582 ntBASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 AC018892.3-201ENST00000623986 2499 ntBASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 KRT8P37-201ENST00000451609 1420 ntBASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHGC4Q9Y5F7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 PRAL-201ENST00000624952 3286 ntBASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 AL355385.1-201ENST00000606123 409 ntBASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 AL590560.3-201ENST00000623350 461 ntBASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 AC100757.3-201ENST00000622361 1406 ntBASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHGC4Q9Y5F7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 REXO1L1P-202ENST00000608646 1974 ntBASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 MIR770-201ENST00000390219 98 ntBASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 AC093214.1-201ENST00000511688 1107 ntBASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms