Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM17Q9Y577 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
TRIM17Q9Y577 PCGF3-213ENST00000620529 1899 ntBASIC17.96■□□□□ 0.47
TRIM17Q9Y577 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM17Q9Y577 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM17Q9Y577 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM17Q9Y577 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.96■□□□□ 0.47
TRIM17Q9Y577 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM17Q9Y577 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TRIM17Q9Y577 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.96■□□□□ 0.46
TRIM17Q9Y577 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
TRIM17Q9Y577 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.46
TRIM17Q9Y577 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 AC016700.1-201ENST00000429424 312 ntBASIC17.95■□□□□ 0.46
TRIM17Q9Y577 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 SPTLC1P5-201ENST00000450718 252 ntBASIC17.95■□□□□ 0.46
TRIM17Q9Y577 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 AP002490.2-201ENST00000524791 560 ntBASIC17.95■□□□□ 0.46
TRIM17Q9Y577 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 AC026740.1-201ENST00000607068 791 ntBASIC17.95■□□□□ 0.46
TRIM17Q9Y577 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
TRIM17Q9Y577 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.94■□□□□ 0.46
TRIM17Q9Y577 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 AC114501.1-201ENST00000445949 172 ntBASIC17.94■□□□□ 0.46
TRIM17Q9Y577 KRT18P25-201ENST00000508931 1278 ntBASIC17.94■□□□□ 0.46
TRIM17Q9Y577 RNA5SP486-201ENST00000515961 83 ntBASIC17.94■□□□□ 0.46
TRIM17Q9Y577 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 AC093813.1-201ENST00000605066 256 ntBASIC17.94■□□□□ 0.46
TRIM17Q9Y577 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 AC138649.2-201ENST00000615886 705 ntBASIC17.94■□□□□ 0.46
TRIM17Q9Y577 AP003419.4-201ENST00000616071 517 ntBASIC17.94■□□□□ 0.46
TRIM17Q9Y577 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 AC006453.4-201ENST00000636949 1252 ntBASIC17.94■□□□□ 0.46
TRIM17Q9Y577 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM17Q9Y577 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms