Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 AC105250.1-201ENST00000509378 2057 ntBASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 ARMC10P1-201ENST00000313754 855 ntBASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 AC026396.1-201ENST00000419388 421 ntBASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 SLC25A6P2-201ENST00000497974 877 ntBASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 AC107918.2-201ENST00000530817 355 ntBASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 LINC01023-201ENST00000606054 436 ntBASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 AC097493.4-201ENST00000641197 219 ntBASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RCL1Q9Y2P8 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 AC112693.3-201ENST00000624819 1983 ntBASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 AL596275.1-201ENST00000423464 877 ntBASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 IGHV3-47-201ENST00000425060 335 ntBASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 AC022616.7-201ENST00000525383 220 ntBASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms