Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC20.69■□□□□ 0.9
PDZRN3Q9UPQ7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC20.69■□□□□ 0.9
PDZRN3Q9UPQ7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC20.69■□□□□ 0.9
PDZRN3Q9UPQ7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDZRN3Q9UPQ7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDZRN3Q9UPQ7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDZRN3Q9UPQ7 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PDZRN3Q9UPQ7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDZRN3Q9UPQ7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 FOXO1B-201ENST00000504678 1527 ntBASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 RPL37AP1-201ENST00000412502 279 ntBASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDZRN3Q9UPQ7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC20.67■□□□□ 0.9
PDZRN3Q9UPQ7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDZRN3Q9UPQ7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC20.67■□□□□ 0.9
PDZRN3Q9UPQ7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
PDZRN3Q9UPQ7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDZRN3Q9UPQ7 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDZRN3Q9UPQ7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDZRN3Q9UPQ7 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDZRN3Q9UPQ7 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDZRN3Q9UPQ7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
PDZRN3Q9UPQ7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC20.67■□□□□ 0.9
PDZRN3Q9UPQ7 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDZRN3Q9UPQ7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PDZRN3Q9UPQ7 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.67■□□□□ 0.9
PDZRN3Q9UPQ7 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC20.67■□□□□ 0.9
PDZRN3Q9UPQ7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.67■□□□□ 0.9
PDZRN3Q9UPQ7 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC20.67■□□□□ 0.9
PDZRN3Q9UPQ7 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC20.67■□□□□ 0.9
PDZRN3Q9UPQ7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
PDZRN3Q9UPQ7 AC004840.1-201ENST00000636359 365 ntBASIC20.67■□□□□ 0.9
PDZRN3Q9UPQ7 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PDZRN3Q9UPQ7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDZRN3Q9UPQ7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC20.67■□□□□ 0.9
PDZRN3Q9UPQ7 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC20.67■□□□□ 0.9
PDZRN3Q9UPQ7 SUPT20HL2-201ENST00000486479 2409 ntBASIC20.67■□□□□ 0.9
PDZRN3Q9UPQ7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDZRN3Q9UPQ7 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PDZRN3Q9UPQ7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDZRN3Q9UPQ7 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDZRN3Q9UPQ7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDZRN3Q9UPQ7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PDZRN3Q9UPQ7 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDZRN3Q9UPQ7 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDZRN3Q9UPQ7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDZRN3Q9UPQ7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDZRN3Q9UPQ7 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PDZRN3Q9UPQ7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC20.66■□□□□ 0.9
PDZRN3Q9UPQ7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDZRN3Q9UPQ7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PDZRN3Q9UPQ7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDZRN3Q9UPQ7 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PDZRN3Q9UPQ7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC20.66■□□□□ 0.9
PDZRN3Q9UPQ7 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
PDZRN3Q9UPQ7 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDZRN3Q9UPQ7 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDZRN3Q9UPQ7 AC098859.1-201ENST00000502915 1238 ntBASIC20.66■□□□□ 0.9
PDZRN3Q9UPQ7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC20.66■□□□□ 0.9
PDZRN3Q9UPQ7 AC093004.1-201ENST00000508850 424 ntBASIC20.66■□□□□ 0.9
PDZRN3Q9UPQ7 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC20.66■□□□□ 0.9
PDZRN3Q9UPQ7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDZRN3Q9UPQ7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms