Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 AC106028.4-201ENST00000614509 607 ntBASIC17.59■□□□□ 0.41
L1RE1Q9UN81 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 Z92544.3-201ENST00000624747 417 ntBASIC17.59■□□□□ 0.41
L1RE1Q9UN81 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
L1RE1Q9UN81 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
L1RE1Q9UN81 PCGF3-213ENST00000620529 1899 ntBASIC17.58■□□□□ 0.41
L1RE1Q9UN81 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.58■□□□□ 0.41
L1RE1Q9UN81 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
L1RE1Q9UN81 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
L1RE1Q9UN81 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
L1RE1Q9UN81 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.58■□□□□ 0.41
L1RE1Q9UN81 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
L1RE1Q9UN81 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.58■□□□□ 0.41
L1RE1Q9UN81 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
L1RE1Q9UN81 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
L1RE1Q9UN81 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
L1RE1Q9UN81 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
L1RE1Q9UN81 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.58■□□□□ 0.4
L1RE1Q9UN81 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.58■□□□□ 0.4
L1RE1Q9UN81 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.58■□□□□ 0.4
L1RE1Q9UN81 AC093724.1-201ENST00000448659 1027 ntBASIC17.58■□□□□ 0.4
L1RE1Q9UN81 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.58■□□□□ 0.4
L1RE1Q9UN81 CYMP-203ENST00000474680 1263 ntBASIC17.58■□□□□ 0.4
L1RE1Q9UN81 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
L1RE1Q9UN81 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.58■□□□□ 0.4
L1RE1Q9UN81 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
L1RE1Q9UN81 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.58■□□□□ 0.4
L1RE1Q9UN81 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.58■□□□□ 0.4
L1RE1Q9UN81 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.58■□□□□ 0.4
L1RE1Q9UN81 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.58■□□□□ 0.4
L1RE1Q9UN81 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
L1RE1Q9UN81 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
L1RE1Q9UN81 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
L1RE1Q9UN81 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
L1RE1Q9UN81 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.58■□□□□ 0.4
L1RE1Q9UN81 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.58■□□□□ 0.4
L1RE1Q9UN81 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.58■□□□□ 0.4
L1RE1Q9UN81 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
L1RE1Q9UN81 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.58■□□□□ 0.4
L1RE1Q9UN81 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
L1RE1Q9UN81 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
L1RE1Q9UN81 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
L1RE1Q9UN81 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
L1RE1Q9UN81 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.58■□□□□ 0.4
L1RE1Q9UN81 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
L1RE1Q9UN81 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.58■□□□□ 0.4
L1RE1Q9UN81 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.57■□□□□ 0.4
L1RE1Q9UN81 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
L1RE1Q9UN81 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.57■□□□□ 0.4
L1RE1Q9UN81 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
L1RE1Q9UN81 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
L1RE1Q9UN81 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
L1RE1Q9UN81 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
L1RE1Q9UN81 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.57■□□□□ 0.4
L1RE1Q9UN81 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.57■□□□□ 0.4
L1RE1Q9UN81 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
L1RE1Q9UN81 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
L1RE1Q9UN81 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
L1RE1Q9UN81 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
L1RE1Q9UN81 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
L1RE1Q9UN81 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.57■□□□□ 0.4
L1RE1Q9UN81 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.57■□□□□ 0.4
L1RE1Q9UN81 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.57■□□□□ 0.4
L1RE1Q9UN81 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
L1RE1Q9UN81 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.57■□□□□ 0.4
L1RE1Q9UN81 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.57■□□□□ 0.4
L1RE1Q9UN81 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
L1RE1Q9UN81 AL009178.2-201ENST00000597278 2719 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms