Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLIP2Q9UDT6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CLIP2Q9UDT6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIP2Q9UDT6 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CLIP2Q9UDT6 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIP2Q9UDT6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.06■□□□□ 0.64
CLIP2Q9UDT6 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.06■□□□□ 0.64
CLIP2Q9UDT6 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.06■□□□□ 0.64
CLIP2Q9UDT6 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.06■□□□□ 0.64
CLIP2Q9UDT6 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.06■□□□□ 0.64
CLIP2Q9UDT6 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.06■□□□□ 0.64
CLIP2Q9UDT6 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.06■□□□□ 0.64
CLIP2Q9UDT6 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.06■□□□□ 0.64
CLIP2Q9UDT6 TEX28P1-201ENST00000613479 1221 ntBASIC19.06■□□□□ 0.64
CLIP2Q9UDT6 TEX28P2-201ENST00000617764 1221 ntBASIC19.06■□□□□ 0.64
CLIP2Q9UDT6 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CLIP2Q9UDT6 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.06■□□□□ 0.64
CLIP2Q9UDT6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.06■□□□□ 0.64
CLIP2Q9UDT6 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIP2Q9UDT6 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIP2Q9UDT6 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIP2Q9UDT6 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.06■□□□□ 0.64
CLIP2Q9UDT6 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.06■□□□□ 0.64
CLIP2Q9UDT6 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIP2Q9UDT6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIP2Q9UDT6 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIP2Q9UDT6 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIP2Q9UDT6 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIP2Q9UDT6 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 AC005052.1-201ENST00000625181 2492 ntBASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 AL035633.1-201ENST00000406139 838 ntBASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 AL079307.3-201ENST00000556114 283 ntBASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 U82695.1-201ENST00000635752 1889 ntBASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.05■□□□□ 0.64
CLIP2Q9UDT6 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.04■□□□□ 0.64
CLIP2Q9UDT6 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIP2Q9UDT6 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIP2Q9UDT6 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.04■□□□□ 0.64
CLIP2Q9UDT6 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIP2Q9UDT6 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIP2Q9UDT6 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLIP2Q9UDT6 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLIP2Q9UDT6 AL365203.3-201ENST00000609742 2057 ntBASIC19.04■□□□□ 0.64
CLIP2Q9UDT6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.04■□□□□ 0.64
CLIP2Q9UDT6 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIP2Q9UDT6 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
CLIP2Q9UDT6 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIP2Q9UDT6 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIP2Q9UDT6 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIP2Q9UDT6 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIP2Q9UDT6 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLIP2Q9UDT6 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.04■□□□□ 0.64
CLIP2Q9UDT6 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.04■□□□□ 0.64
CLIP2Q9UDT6 LINC02560-201ENST00000596379 459 ntBASIC19.04■□□□□ 0.64
CLIP2Q9UDT6 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC19.04■□□□□ 0.64
CLIP2Q9UDT6 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLIP2Q9UDT6 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIP2Q9UDT6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIP2Q9UDT6 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CLIP2Q9UDT6 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIP2Q9UDT6 ALOX12P2-203ENST00000570921 1945 ntBASIC19.04■□□□□ 0.64
CLIP2Q9UDT6 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIP2Q9UDT6 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIP2Q9UDT6 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIP2Q9UDT6 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIP2Q9UDT6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.03■□□□□ 0.64
CLIP2Q9UDT6 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms