Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HMG20BQ9P0W2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 SUOX-214ENST00000551841 906 ntTSL 3 BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 KRT8P37-201ENST00000451609 1420 ntBASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMG20BQ9P0W2 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC19.47■□□□□ 0.71
HMG20BQ9P0W2 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMG20BQ9P0W2 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMG20BQ9P0W2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HMG20BQ9P0W2 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
HMG20BQ9P0W2 AC134407.2-201ENST00000625089 1978 ntBASIC19.47■□□□□ 0.71
HMG20BQ9P0W2 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMG20BQ9P0W2 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
HMG20BQ9P0W2 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HMG20BQ9P0W2 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HMG20BQ9P0W2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HMG20BQ9P0W2 AL589987.1-201ENST00000453380 819 ntBASIC19.47■□□□□ 0.71
HMG20BQ9P0W2 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.47■□□□□ 0.71
HMG20BQ9P0W2 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
HMG20BQ9P0W2 ARL16-202ENST00000570561 768 ntTSL 2 BASIC19.47■□□□□ 0.71
HMG20BQ9P0W2 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
HMG20BQ9P0W2 AL662799.1-202ENST00000614205 422 ntBASIC19.47■□□□□ 0.71
HMG20BQ9P0W2 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19.47■□□□□ 0.71
HMG20BQ9P0W2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC19.47■□□□□ 0.71
HMG20BQ9P0W2 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.47■□□□□ 0.71
HMG20BQ9P0W2 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HMG20BQ9P0W2 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HMG20BQ9P0W2 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMG20BQ9P0W2 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMG20BQ9P0W2 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMG20BQ9P0W2 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMG20BQ9P0W2 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.47■□□□□ 0.71
HMG20BQ9P0W2 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 HAUS4P1-201ENST00000406739 1145 ntBASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 AP005018.1-201ENST00000525475 301 ntBASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.46■□□□□ 0.71
HMG20BQ9P0W2 SRD5A3P1-201ENST00000603021 949 ntBASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms