Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A20Q9NP91 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC6A20Q9NP91 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A20Q9NP91 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A20Q9NP91 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SLC6A20Q9NP91 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A20Q9NP91 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A20Q9NP91 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A20Q9NP91 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A20Q9NP91 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
SLC6A20Q9NP91 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.4■□□□□ 0.06
SLC6A20Q9NP91 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC6A20Q9NP91 HIST3H2BA-201ENST00000436555 524 ntBASIC15.4■□□□□ 0.06
SLC6A20Q9NP91 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC6A20Q9NP91 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A20Q9NP91 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A20Q9NP91 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.4■□□□□ 0.06
SLC6A20Q9NP91 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A20Q9NP91 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC6A20Q9NP91 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SLC6A20Q9NP91 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A20Q9NP91 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A20Q9NP91 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC6A20Q9NP91 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC6A20Q9NP91 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A20Q9NP91 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A20Q9NP91 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC6A20Q9NP91 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SLC6A20Q9NP91 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A20Q9NP91 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 AZGP1P1-201ENST00000411909 902 ntBASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 TSSK5P-201ENST00000423978 907 ntBASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 AL512361.1-201ENST00000554200 418 ntBASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 AL590560.3-201ENST00000623350 461 ntBASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A20Q9NP91 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A20Q9NP91 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.38■□□□□ 0.05
SLC6A20Q9NP91 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A20Q9NP91 REXO1L1P-202ENST00000608646 1974 ntBASIC15.38■□□□□ 0.05
SLC6A20Q9NP91 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.38■□□□□ 0.05
SLC6A20Q9NP91 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A20Q9NP91 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A20Q9NP91 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A20Q9NP91 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A20Q9NP91 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A20Q9NP91 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A20Q9NP91 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A20Q9NP91 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A20Q9NP91 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A20Q9NP91 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A20Q9NP91 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.38■□□□□ 0.05
SLC6A20Q9NP91 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC6A20Q9NP91 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.38■□□□□ 0.05
SLC6A20Q9NP91 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.38■□□□□ 0.05
SLC6A20Q9NP91 AC241585.1-201ENST00000433527 519 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms