Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 IL9RP2-201ENST00000423948 1312 ntBASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRTM1Q9HBL6 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 AC098859.1-201ENST00000502915 1238 ntBASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 RARRES2P8-201ENST00000566335 367 ntBASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 AL138918.1-201ENST00000568306 659 ntBASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 AC099522.2-201ENST00000607001 744 ntBASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 AC136621.1-201ENST00000624017 2304 ntBASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 ZNF259P1-201ENST00000407656 1365 ntBASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRTM1Q9HBL6 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.46■□□□□ 0.07
LRTM1Q9HBL6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms