Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIPK3Q9H422 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.43■□□□□ 0.38
HIPK3Q9H422 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
HIPK3Q9H422 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HIPK3Q9H422 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.43■□□□□ 0.38
HIPK3Q9H422 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIPK3Q9H422 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.43■□□□□ 0.38
HIPK3Q9H422 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HIPK3Q9H422 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIPK3Q9H422 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIPK3Q9H422 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HIPK3Q9H422 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.43■□□□□ 0.38
HIPK3Q9H422 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HIPK3Q9H422 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.43■□□□□ 0.38
HIPK3Q9H422 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIPK3Q9H422 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIPK3Q9H422 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HIPK3Q9H422 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HIPK3Q9H422 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.42■□□□□ 0.38
HIPK3Q9H422 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HIPK3Q9H422 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIPK3Q9H422 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIPK3Q9H422 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.42■□□□□ 0.38
HIPK3Q9H422 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIPK3Q9H422 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIPK3Q9H422 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HIPK3Q9H422 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HIPK3Q9H422 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HIPK3Q9H422 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.42■□□□□ 0.38
HIPK3Q9H422 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.42■□□□□ 0.38
HIPK3Q9H422 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.42■□□□□ 0.38
HIPK3Q9H422 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HIPK3Q9H422 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.42■□□□□ 0.38
HIPK3Q9H422 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HIPK3Q9H422 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.42■□□□□ 0.38
HIPK3Q9H422 KRT90P-201ENST00000549264 1064 ntBASIC17.42■□□□□ 0.38
HIPK3Q9H422 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HIPK3Q9H422 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.42■□□□□ 0.38
HIPK3Q9H422 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.42■□□□□ 0.38
HIPK3Q9H422 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HIPK3Q9H422 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.42■□□□□ 0.38
HIPK3Q9H422 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
HIPK3Q9H422 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HIPK3Q9H422 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIPK3Q9H422 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIPK3Q9H422 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIPK3Q9H422 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIPK3Q9H422 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
HIPK3Q9H422 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIPK3Q9H422 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.42■□□□□ 0.38
HIPK3Q9H422 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIPK3Q9H422 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIPK3Q9H422 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.41■□□□□ 0.38
HIPK3Q9H422 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HIPK3Q9H422 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIPK3Q9H422 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIPK3Q9H422 BNIP3P1-202ENST00000550043 1585 ntBASIC17.41■□□□□ 0.38
HIPK3Q9H422 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HIPK3Q9H422 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HIPK3Q9H422 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIPK3Q9H422 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIPK3Q9H422 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIPK3Q9H422 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIPK3Q9H422 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.41■□□□□ 0.38
HIPK3Q9H422 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIPK3Q9H422 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.41■□□□□ 0.38
HIPK3Q9H422 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.41■□□□□ 0.38
HIPK3Q9H422 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.41■□□□□ 0.38
HIPK3Q9H422 AC093433.1-201ENST00000458048 571 ntBASIC17.41■□□□□ 0.38
HIPK3Q9H422 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.41■□□□□ 0.38
HIPK3Q9H422 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HIPK3Q9H422 SLED1-202ENST00000512051 380 ntBASIC17.41■□□□□ 0.38
HIPK3Q9H422 ZNF767P-206ENST00000513792 565 ntBASIC17.41■□□□□ 0.38
HIPK3Q9H422 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.41■□□□□ 0.38
HIPK3Q9H422 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.41■□□□□ 0.38
HIPK3Q9H422 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.41■□□□□ 0.38
HIPK3Q9H422 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HIPK3Q9H422 AC005252.2-201ENST00000624630 1141 ntBASIC17.41■□□□□ 0.38
HIPK3Q9H422 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
HIPK3Q9H422 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HIPK3Q9H422 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIPK3Q9H422 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIPK3Q9H422 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIPK3Q9H422 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HIPK3Q9H422 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HIPK3Q9H422 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIPK3Q9H422 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIPK3Q9H422 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIPK3Q9H422 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.4■□□□□ 0.38
HIPK3Q9H422 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HIPK3Q9H422 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
HIPK3Q9H422 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIPK3Q9H422 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.4■□□□□ 0.38
HIPK3Q9H422 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.4■□□□□ 0.38
HIPK3Q9H422 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HIPK3Q9H422 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HIPK3Q9H422 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
HIPK3Q9H422 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIPK3Q9H422 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.4■□□□□ 0.38
HIPK3Q9H422 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms