Protein–RNA interactions for Protein: Q9C0K7

STRADB, STE20-related kinase adapter protein beta, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBQ9C0K7 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.17■□□□□ 0.02
STRADBQ9C0K7 BRI3BPP1-201ENST00000594224 787 ntBASIC15.17■□□□□ 0.02
STRADBQ9C0K7 BNIP3P29-201ENST00000598302 571 ntBASIC15.17■□□□□ 0.02
STRADBQ9C0K7 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.17■□□□□ 0.02
STRADBQ9C0K7 AC011447.5-201ENST00000616168 564 ntBASIC15.17■□□□□ 0.02
STRADBQ9C0K7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
STRADBQ9C0K7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
STRADBQ9C0K7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
STRADBQ9C0K7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
STRADBQ9C0K7 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.17■□□□□ 0.02
STRADBQ9C0K7 PDIA3P1-201ENST00000471856 1510 ntBASIC15.17■□□□□ 0.02
STRADBQ9C0K7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
STRADBQ9C0K7 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
STRADBQ9C0K7 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 AL359711.2-201ENST00000563105 872 ntBASIC15.16■□□□□ 0.02
STRADBQ9C0K7 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 AC009486.1-201ENST00000569860 813 ntBASIC15.16■□□□□ 0.02
STRADBQ9C0K7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 INTS4P2-202ENST00000614726 2019 ntBASIC15.16■□□□□ 0.02
STRADBQ9C0K7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.16■□□□□ 0.02
STRADBQ9C0K7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 FAM86MP-201ENST00000340703 885 ntBASIC15.15■□□□□ 0.02
STRADBQ9C0K7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 AC005229.1-201ENST00000392885 409 ntBASIC15.15■□□□□ 0.02
STRADBQ9C0K7 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 TOMM22P5-201ENST00000416399 439 ntBASIC15.15■□□□□ 0.02
STRADBQ9C0K7 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 SLED1-202ENST00000512051 380 ntBASIC15.15■□□□□ 0.02
STRADBQ9C0K7 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
STRADBQ9C0K7 BNIP3P1-202ENST00000550043 1585 ntBASIC15.15■□□□□ 0.02
STRADBQ9C0K7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms