Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FOXP3Q9BZS1 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.62■□□□□ 0.25
FOXP3Q9BZS1 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.62■□□□□ 0.25
FOXP3Q9BZS1 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
FOXP3Q9BZS1 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FOXP3Q9BZS1 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FOXP3Q9BZS1 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FOXP3Q9BZS1 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXP3Q9BZS1 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXP3Q9BZS1 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 FAM45BP-202ENST00000592932 1624 ntBASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 FAM185BP-201ENST00000443595 716 ntBASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 AC093724.1-201ENST00000448659 1027 ntBASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 AP002472.1-201ENST00000577490 586 ntBASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 AC106028.4-201ENST00000614509 607 ntBASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 AL109954.1-202ENST00000564051 2148 ntBASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FOXP3Q9BZS1 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 RHOQP3-201ENST00000437982 621 ntBASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 AC074386.1-202ENST00000463561 864 ntBASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 AC023141.13-201ENST00000604991 943 ntBASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 AL645728.2-201ENST00000641974 660 ntBASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 AC136621.1-201ENST00000624017 2304 ntBASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 TNRC18P2-201ENST00000417666 2714 ntBASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXP3Q9BZS1 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms