Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 DKFZP434H168-201ENST00000567381 1905 ntBASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 PGR-210ENST00000619228 3038 ntTSL 5 BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 AC011477.6-201ENST00000604980 1927 ntBASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 AL671277.1-201ENST00000429656 993 ntBASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 ADH5P3-201ENST00000433842 1137 ntBASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 SSR4P1-203ENST00000599569 2260 ntBASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UPF3BQ9BZI7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
UPF3BQ9BZI7 AC092127.1-201ENST00000567093 3455 ntBASIC19.17■□□□□ 0.66
UPF3BQ9BZI7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UPF3BQ9BZI7 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC19.17■□□□□ 0.66
UPF3BQ9BZI7 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UPF3BQ9BZI7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.17■□□□□ 0.66
UPF3BQ9BZI7 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UPF3BQ9BZI7 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.17■□□□□ 0.66
UPF3BQ9BZI7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
UPF3BQ9BZI7 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UPF3BQ9BZI7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UPF3BQ9BZI7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UPF3BQ9BZI7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UPF3BQ9BZI7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UPF3BQ9BZI7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UPF3BQ9BZI7 TFAMP1-201ENST00000412727 736 ntBASIC19.17■□□□□ 0.66
UPF3BQ9BZI7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.17■□□□□ 0.66
UPF3BQ9BZI7 HTR5BP-201ENST00000430851 1154 ntBASIC19.17■□□□□ 0.66
UPF3BQ9BZI7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.17■□□□□ 0.66
UPF3BQ9BZI7 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.17■□□□□ 0.66
UPF3BQ9BZI7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.17■□□□□ 0.66
UPF3BQ9BZI7 AC027307.2-201ENST00000591252 911 ntBASIC19.17■□□□□ 0.66
UPF3BQ9BZI7 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
UPF3BQ9BZI7 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
UPF3BQ9BZI7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC19.17■□□□□ 0.66
UPF3BQ9BZI7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UPF3BQ9BZI7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.17■□□□□ 0.66
UPF3BQ9BZI7 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC19.17■□□□□ 0.66
UPF3BQ9BZI7 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UPF3BQ9BZI7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UPF3BQ9BZI7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UPF3BQ9BZI7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms