Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PCDH11XQ9BZA7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
PCDH11XQ9BZA7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDH11XQ9BZA7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PCDH11XQ9BZA7 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH11XQ9BZA7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
PCDH11XQ9BZA7 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH11XQ9BZA7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH11XQ9BZA7 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PCDH11XQ9BZA7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 KSR1-207ENST00000578981 748 ntTSL 4 BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH11XQ9BZA7 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 GUK1-206ENST00000366723 845 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 PGGT1BP2-201ENST00000398621 1028 ntBASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 AC006033.1-201ENST00000440505 426 ntBASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 AHRR-211ENST00000515206 462 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 AC023310.1-201ENST00000554836 735 ntBASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 AC091271.1-201ENST00000611877 1162 ntBASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC20.53■□□□□ 0.88
PCDH11XQ9BZA7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH11XQ9BZA7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH11XQ9BZA7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDH11XQ9BZA7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH11XQ9BZA7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH11XQ9BZA7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PCDH11XQ9BZA7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PCDH11XQ9BZA7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH11XQ9BZA7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH11XQ9BZA7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH11XQ9BZA7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH11XQ9BZA7 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms