Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
KRTAP3-1Q9BYR8 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
KRTAP3-1Q9BYR8 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
KRTAP3-1Q9BYR8 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.09
KRTAP3-1Q9BYR8 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC8.21□□□□□ -1.09
KRTAP3-1Q9BYR8 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.09
KRTAP3-1Q9BYR8 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
KRTAP3-1Q9BYR8 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC8.21□□□□□ -1.09
KRTAP3-1Q9BYR8 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
KRTAP3-1Q9BYR8 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
KRTAP3-1Q9BYR8 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC8.21□□□□□ -1.09
KRTAP3-1Q9BYR8 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
KRTAP3-1Q9BYR8 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.09
KRTAP3-1Q9BYR8 GOLGA8DP-202ENST00000341390 2184 ntBASIC8.21□□□□□ -1.09
KRTAP3-1Q9BYR8 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
KRTAP3-1Q9BYR8 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
KRTAP3-1Q9BYR8 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.09
KRTAP3-1Q9BYR8 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC8.21□□□□□ -1.09
KRTAP3-1Q9BYR8 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
KRTAP3-1Q9BYR8 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
KRTAP3-1Q9BYR8 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
KRTAP3-1Q9BYR8 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 VN1R11P-201ENST00000407795 868 ntBASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 PPP2R2DP1-201ENST00000420526 637 ntBASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 FAM185BP-201ENST00000443595 716 ntBASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 AC114495.2-201ENST00000452686 437 ntBASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 CSNK1A1P3-201ENST00000504105 330 ntBASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 KRT18P31-201ENST00000506277 1292 ntBASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 LYRM2-204ENST00000520441 791 ntTSL 3 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 IGHV3-65-201ENST00000523210 341 ntBASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 EHF-205ENST00000527935 557 ntTSL 2 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 ZNF506-204ENST00000545006 1007 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 AC103996.2-201ENST00000556763 915 ntTSL 3 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 AL590133.2-202ENST00000561111 642 ntTSL 3 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 PNMT-203ENST00000581428 677 ntTSL 2 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 AC021097.1-201ENST00000607902 574 ntBASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 PARN-202ENST00000420015 2360 ntTSL 2 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 CHAC2-201ENST00000295304 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 LRRFIP1P1-201ENST00000498774 2246 ntBASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC8.21□□□□□ -1.1
KRTAP3-1Q9BYR8 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP3-1Q9BYR8 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP3-1Q9BYR8 MARS-233ENST00000628866 2583 ntTSL 5 BASIC8.2□□□□□ -1.1
KRTAP3-1Q9BYR8 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP3-1Q9BYR8 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC8.2□□□□□ -1.1
KRTAP3-1Q9BYR8 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC8.2□□□□□ -1.1
KRTAP3-1Q9BYR8 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms