Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 HIST2H2BA-201ENST00000412169 381 ntBASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 KLF2P2-201ENST00000416807 1039 ntBASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 KRT18P43-201ENST00000469825 1281 ntBASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 AL391280.1-201ENST00000506969 1062 ntBASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 SNORD3B-2-202ENST00000571722 791 ntBASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL25A1Q9BXS0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
COL25A1Q9BXS0 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
COL25A1Q9BXS0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
COL25A1Q9BXS0 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
COL25A1Q9BXS0 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
COL25A1Q9BXS0 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
COL25A1Q9BXS0 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
COL25A1Q9BXS0 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.83■□□□□ 0.12
COL25A1Q9BXS0 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL25A1Q9BXS0 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COL25A1Q9BXS0 STK16-203ENST00000409516 895 ntTSL 2 BASIC15.83■□□□□ 0.12
COL25A1Q9BXS0 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC15.83■□□□□ 0.12
COL25A1Q9BXS0 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC15.83■□□□□ 0.12
COL25A1Q9BXS0 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC15.83■□□□□ 0.12
COL25A1Q9BXS0 CHCHD2P9-201ENST00000461726 456 ntBASIC15.83■□□□□ 0.12
COL25A1Q9BXS0 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.83■□□□□ 0.12
COL25A1Q9BXS0 CHCHD2P2-201ENST00000503744 321 ntBASIC15.83■□□□□ 0.12
COL25A1Q9BXS0 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC15.83■□□□□ 0.12
COL25A1Q9BXS0 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COL25A1Q9BXS0 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
COL25A1Q9BXS0 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
COL25A1Q9BXS0 AC025262.2-201ENST00000623975 1056 ntBASIC15.83■□□□□ 0.12
COL25A1Q9BXS0 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.12
COL25A1Q9BXS0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL25A1Q9BXS0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL25A1Q9BXS0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL25A1Q9BXS0 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.83■□□□□ 0.12
COL25A1Q9BXS0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COL25A1Q9BXS0 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL25A1Q9BXS0 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL25A1Q9BXS0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL25A1Q9BXS0 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.83■□□□□ 0.12
COL25A1Q9BXS0 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 AL627422.1-201ENST00000434104 580 ntBASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 AC092638.2-201ENST00000441105 947 ntBASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 AC008723.1-201ENST00000506922 207 ntBASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms