Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 API5-202ENST00000420461 2009 ntTSL 2 BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 AC009477.1-201ENST00000452936 217 ntBASIC19.35■□□□□ 0.69
SALL3Q9BXA9 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 DUX4L27-201ENST00000554796 1261 ntBASIC19.35■□□□□ 0.69
SALL3Q9BXA9 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC19.35■□□□□ 0.69
SALL3Q9BXA9 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 PGR-210ENST00000619228 3038 ntTSL 5 BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 AC092183.1-201ENST00000469884 875 ntBASIC19.34■□□□□ 0.69
SALL3Q9BXA9 AC067863.1-201ENST00000494933 530 ntBASIC19.34■□□□□ 0.69
SALL3Q9BXA9 CMC2-214ENST00000565925 640 ntTSL 5 BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 AC100757.3-201ENST00000622361 1406 ntBASIC19.34■□□□□ 0.69
SALL3Q9BXA9 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.34■□□□□ 0.69
SALL3Q9BXA9 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SALL3Q9BXA9 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SALL3Q9BXA9 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC19.33■□□□□ 0.69
SALL3Q9BXA9 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
SALL3Q9BXA9 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.33■□□□□ 0.69
SALL3Q9BXA9 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SALL3Q9BXA9 AC087499.5-201ENST00000452760 1342 ntBASIC19.33■□□□□ 0.69
SALL3Q9BXA9 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SALL3Q9BXA9 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.69
SALL3Q9BXA9 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC19.33■□□□□ 0.69
SALL3Q9BXA9 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC19.33■□□□□ 0.69
SALL3Q9BXA9 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC19.33■□□□□ 0.69
SALL3Q9BXA9 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SALL3Q9BXA9 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SALL3Q9BXA9 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.33■□□□□ 0.69
SALL3Q9BXA9 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SALL3Q9BXA9 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.33■□□□□ 0.69
SALL3Q9BXA9 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC19.33■□□□□ 0.69
SALL3Q9BXA9 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC19.33■□□□□ 0.69
SALL3Q9BXA9 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.33■□□□□ 0.69
SALL3Q9BXA9 LINC01115-203ENST00000606068 577 ntBASIC19.33■□□□□ 0.69
SALL3Q9BXA9 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC19.33■□□□□ 0.69
SALL3Q9BXA9 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC19.33■□□□□ 0.69
SALL3Q9BXA9 AL590560.3-201ENST00000623350 461 ntBASIC19.33■□□□□ 0.69
SALL3Q9BXA9 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SALL3Q9BXA9 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SALL3Q9BXA9 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC19.33■□□□□ 0.69
SALL3Q9BXA9 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms