Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 TFAMP1-201ENST00000412727 736 ntBASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 AC093520.2-201ENST00000561830 333 ntBASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 RARRES2P8-201ENST00000566335 367 ntBASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 MIR3197-201ENST00000582241 73 ntBASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 AC011467.4-201ENST00000594891 528 ntBASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TRAF4Q9BUZ4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 AL122018.1-201ENST00000446607 2310 ntBASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 AC005237.2-201ENST00000434368 219 ntBASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 AL161645.1-201ENST00000622716 1255 ntBASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 AP002414.2-201ENST00000591780 3365 ntBASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF4Q9BUZ4 AKAP8P1-201ENST00000434743 1349 ntBASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 AC012569.1-201ENST00000591191 1524 ntBASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAF4Q9BUZ4 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms