Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL12A1Q99715 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL12A1Q99715 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.76□□□□□ -0.21
COL12A1Q99715 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
COL12A1Q99715 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
COL12A1Q99715 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL12A1Q99715 AGPAT5P1-201ENST00000455855 1019 ntBASIC13.76□□□□□ -0.21
COL12A1Q99715 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL12A1Q99715 AC022748.3-201ENST00000621828 275 ntBASIC13.76□□□□□ -0.21
COL12A1Q99715 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL12A1Q99715 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC13.76□□□□□ -0.21
COL12A1Q99715 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL12A1Q99715 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL12A1Q99715 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.76□□□□□ -0.21
COL12A1Q99715 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL12A1Q99715 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL12A1Q99715 AC020763.4-201ENST00000623414 4170 ntBASIC13.76□□□□□ -0.21
COL12A1Q99715 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.76□□□□□ -0.21
COL12A1Q99715 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL12A1Q99715 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL12A1Q99715 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL12A1Q99715 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL12A1Q99715 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
COL12A1Q99715 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC13.76□□□□□ -0.21
COL12A1Q99715 SCARNA21-201ENST00000517026 139 ntBASIC13.76□□□□□ -0.21
COL12A1Q99715 AC005730.2-201ENST00000564549 1184 ntBASIC13.76□□□□□ -0.21
COL12A1Q99715 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
COL12A1Q99715 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL12A1Q99715 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.76□□□□□ -0.21
COL12A1Q99715 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL12A1Q99715 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL12A1Q99715 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL12A1Q99715 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.75□□□□□ -0.21
COL12A1Q99715 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC13.75□□□□□ -0.21
COL12A1Q99715 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL12A1Q99715 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC13.75□□□□□ -0.21
COL12A1Q99715 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC13.75□□□□□ -0.21
COL12A1Q99715 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL12A1Q99715 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC13.75□□□□□ -0.21
COL12A1Q99715 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL12A1Q99715 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL12A1Q99715 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL12A1Q99715 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL12A1Q99715 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.75□□□□□ -0.21
COL12A1Q99715 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL12A1Q99715 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.75□□□□□ -0.21
COL12A1Q99715 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL12A1Q99715 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.75□□□□□ -0.21
COL12A1Q99715 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
COL12A1Q99715 MIR4321-201ENST00000592276 80 ntBASIC13.75□□□□□ -0.21
COL12A1Q99715 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.75□□□□□ -0.21
COL12A1Q99715 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.75□□□□□ -0.21
COL12A1Q99715 AC006453.4-201ENST00000636949 1252 ntBASIC13.75□□□□□ -0.21
COL12A1Q99715 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.75□□□□□ -0.21
COL12A1Q99715 AC025271.4-201ENST00000621477 1726 ntBASIC13.75□□□□□ -0.21
COL12A1Q99715 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL12A1Q99715 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC13.75□□□□□ -0.21
COL12A1Q99715 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC13.75□□□□□ -0.21
COL12A1Q99715 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL12A1Q99715 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL12A1Q99715 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.75□□□□□ -0.21
COL12A1Q99715 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC13.75□□□□□ -0.21
COL12A1Q99715 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.75□□□□□ -0.21
COL12A1Q99715 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.75□□□□□ -0.21
COL12A1Q99715 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL12A1Q99715 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.75□□□□□ -0.21
COL12A1Q99715 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
COL12A1Q99715 AL133466.1-201ENST00000447582 150 ntBASIC13.75□□□□□ -0.21
COL12A1Q99715 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL12A1Q99715 AC026410.1-201ENST00000507366 1101 ntBASIC13.75□□□□□ -0.21
COL12A1Q99715 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC13.75□□□□□ -0.21
COL12A1Q99715 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL12A1Q99715 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.75□□□□□ -0.21
COL12A1Q99715 ETV2-207ENST00000619399 994 ntTSL 5 BASIC13.75□□□□□ -0.21
COL12A1Q99715 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.75□□□□□ -0.21
COL12A1Q99715 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL12A1Q99715 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC13.74□□□□□ -0.21
COL12A1Q99715 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
COL12A1Q99715 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL12A1Q99715 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL12A1Q99715 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL12A1Q99715 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COL12A1Q99715 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL12A1Q99715 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.74□□□□□ -0.21
COL12A1Q99715 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COL12A1Q99715 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC13.74□□□□□ -0.21
COL12A1Q99715 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
COL12A1Q99715 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL12A1Q99715 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.74□□□□□ -0.21
COL12A1Q99715 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL12A1Q99715 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COL12A1Q99715 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL12A1Q99715 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.74□□□□□ -0.21
COL12A1Q99715 AL391256.1-201ENST00000443260 1855 ntBASIC13.74□□□□□ -0.21
COL12A1Q99715 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL12A1Q99715 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL12A1Q99715 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC13.74□□□□□ -0.21
COL12A1Q99715 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL12A1Q99715 EML3-212ENST00000494176 2901 ntTSL 2 BASIC13.74□□□□□ -0.21
COL12A1Q99715 EML3-216ENST00000529309 2909 ntTSL 2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms