Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
MUC4Q99102 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
MUC4Q99102 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
MUC4Q99102 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
MUC4Q99102 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
MUC4Q99102 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
MUC4Q99102 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
MUC4Q99102 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
MUC4Q99102 METTL26-205ENST00000397666 726 ntTSL 2 BASIC11.77□□□□□ -0.53
MUC4Q99102 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
MUC4Q99102 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC11.77□□□□□ -0.53
MUC4Q99102 PUDP-206ENST00000540122 825 ntTSL 2 BASIC11.77□□□□□ -0.53
MUC4Q99102 PDPK2P-202ENST00000562415 1191 ntBASIC11.77□□□□□ -0.53
MUC4Q99102 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC11.77□□□□□ -0.53
MUC4Q99102 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC11.77□□□□□ -0.53
MUC4Q99102 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC11.77□□□□□ -0.53
MUC4Q99102 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
MUC4Q99102 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
MUC4Q99102 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
MUC4Q99102 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
MUC4Q99102 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
MUC4Q99102 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
MUC4Q99102 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
MUC4Q99102 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
MUC4Q99102 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
MUC4Q99102 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC11.76□□□□□ -0.53
MUC4Q99102 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
MUC4Q99102 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC11.76□□□□□ -0.53
MUC4Q99102 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
MUC4Q99102 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
MUC4Q99102 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC11.76□□□□□ -0.53
MUC4Q99102 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
MUC4Q99102 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
MUC4Q99102 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC11.76□□□□□ -0.53
MUC4Q99102 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
MUC4Q99102 AL513477.1-201ENST00000602865 2407 ntBASIC11.76□□□□□ -0.53
MUC4Q99102 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
MUC4Q99102 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC11.76□□□□□ -0.53
MUC4Q99102 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
MUC4Q99102 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
MUC4Q99102 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
MUC4Q99102 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC11.76□□□□□ -0.53
MUC4Q99102 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
MUC4Q99102 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
MUC4Q99102 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
MUC4Q99102 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
MUC4Q99102 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
MUC4Q99102 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
MUC4Q99102 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC11.76□□□□□ -0.53
MUC4Q99102 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
MUC4Q99102 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC11.76□□□□□ -0.53
MUC4Q99102 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
MUC4Q99102 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC11.76□□□□□ -0.53
MUC4Q99102 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC11.76□□□□□ -0.53
MUC4Q99102 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
MUC4Q99102 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
MUC4Q99102 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC11.76□□□□□ -0.53
MUC4Q99102 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
MUC4Q99102 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC11.76□□□□□ -0.53
MUC4Q99102 TMBIM7P-203ENST00000641617 1718 ntBASIC11.76□□□□□ -0.53
MUC4Q99102 AC092865.6-201ENST00000642101 219 ntBASIC11.76□□□□□ -0.53
MUC4Q99102 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC11.76□□□□□ -0.53
MUC4Q99102 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
MUC4Q99102 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC11.76□□□□□ -0.53
MUC4Q99102 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC11.76□□□□□ -0.53
MUC4Q99102 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
MUC4Q99102 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
MUC4Q99102 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC11.76□□□□□ -0.53
MUC4Q99102 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
MUC4Q99102 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
MUC4Q99102 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
MUC4Q99102 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC11.76□□□□□ -0.53
MUC4Q99102 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
MUC4Q99102 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
MUC4Q99102 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
MUC4Q99102 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
MUC4Q99102 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC11.76□□□□□ -0.53
MUC4Q99102 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC11.76□□□□□ -0.53
MUC4Q99102 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
MUC4Q99102 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
MUC4Q99102 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC11.75□□□□□ -0.53
MUC4Q99102 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
MUC4Q99102 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
MUC4Q99102 PTMS-202ENST00000389462 773 ntTSL 2 BASIC11.75□□□□□ -0.53
MUC4Q99102 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
MUC4Q99102 AC140658.5-201ENST00000438532 169 ntBASIC11.75□□□□□ -0.53
MUC4Q99102 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC11.75□□□□□ -0.53
MUC4Q99102 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC11.75□□□□□ -0.53
MUC4Q99102 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC11.75□□□□□ -0.53
MUC4Q99102 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC11.75□□□□□ -0.53
MUC4Q99102 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC11.75□□□□□ -0.53
MUC4Q99102 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC11.75□□□□□ -0.53
MUC4Q99102 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC11.75□□□□□ -0.53
MUC4Q99102 AC105250.1-201ENST00000509378 2057 ntBASIC11.75□□□□□ -0.53
MUC4Q99102 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
MUC4Q99102 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
MUC4Q99102 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC11.75□□□□□ -0.53
MUC4Q99102 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
MUC4Q99102 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC11.75□□□□□ -0.53
MUC4Q99102 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms