Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 RPL13AP25-201ENST00000484130 612 ntBASIC14.1□□□□□ -0.15
PCNX1Q96RV3 TDH-203ENST00000531764 1110 ntBASIC14.1□□□□□ -0.15
PCNX1Q96RV3 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 RNA5SP412-201ENST00000516234 123 ntBASIC14.1□□□□□ -0.15
PCNX1Q96RV3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
PCNX1Q96RV3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 BOLA2P3-201ENST00000404566 256 ntBASIC14.09□□□□□ -0.15
PCNX1Q96RV3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 AC079316.1-201ENST00000548397 411 ntBASIC14.09□□□□□ -0.15
PCNX1Q96RV3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 LETM1P2-201ENST00000597330 2178 ntBASIC14.09□□□□□ -0.15
PCNX1Q96RV3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 AC020907.1-201ENST00000616460 1350 ntBASIC14.09□□□□□ -0.15
PCNX1Q96RV3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 HLA-A-202ENST00000376806 1854 ntBASIC14.09□□□□□ -0.15
PCNX1Q96RV3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 FO393414.2-201ENST00000405153 598 ntBASIC14.09□□□□□ -0.15
PCNX1Q96RV3 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 MIR5189-201ENST00000577370 114 ntBASIC14.09□□□□□ -0.15
PCNX1Q96RV3 GNRHR2-203ENST00000581100 1187 ntBASIC14.09□□□□□ -0.15
PCNX1Q96RV3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 AC080080.1-201ENST00000625121 2420 ntBASIC14.09□□□□□ -0.15
PCNX1Q96RV3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCNX1Q96RV3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
PCNX1Q96RV3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
PCNX1Q96RV3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PCNX1Q96RV3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms