Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 AC132938.5-201ENST00000624980 1813 ntBASIC15.19■□□□□ 0.02
NR1H4Q96RI1 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 AL592424.1-201ENST00000563624 1536 ntBASIC15.18■□□□□ 0.02
NR1H4Q96RI1 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 AC027601.5-201ENST00000624065 2482 ntBASIC15.18■□□□□ 0.02
NR1H4Q96RI1 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 AC087499.1-201ENST00000418141 1075 ntBASIC15.18■□□□□ 0.02
NR1H4Q96RI1 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 TCAF1P1-201ENST00000414990 2232 ntBASIC15.18■□□□□ 0.02
NR1H4Q96RI1 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.18■□□□□ 0.02
NR1H4Q96RI1 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 PID1-202ENST00000392054 2745 ntTSL 2 BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
NR1H4Q96RI1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NR1H4Q96RI1 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms